Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0021 ATGAAGGAGACGGAAAAGAAGAAGTACCCCATCGGGGCGGAGTACTACCTTCTATACGAGGAGATTGGGCAGGGTGTAAGCGCCTCTGTCCACCGCGCTCTCTGCGTCCCCCTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATTGCGATCTGAACAACGTTTCTCGTGAGGCCCAAACAATGATCCTTGTGGACCACCCTAACGTTCTGAAATCACACTGCTCCTTCGTGAGCGAGCACAATCTGTGGGTTGTGATGCCCTTCATGTCCGGCGGTTCATGTCTCCACATACTCAAAGCCGCCCACCCCGACGGACTCGAGGAGGTTATCATTGCAACCGTTCTCAAAGAGGTCTTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCCGGCAACATTCTCATCGATTCACGCGGCGCCGTCAAGCTCGGCGACTTTGGCGTCTCTGCCTGCCTCTTTGATTCCGGTGACCGCCAACGCACCAGGAACACATTTGTCGGAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTTCACGGCTATAATTTCAAAGCTGACATCTGGTCATTTGGTATAACCGCCTTGGAGCTTGCACATGGCCATGCTCCTTTCTCAAAATTTCCACCAATGAAGGTACTGCTCATGACTCTGCAAAATGCACCCCCCGGCCTTGACTACGAAAGGGATAGGAAGTTCAGTAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCCTCTGCCAGCAAGTTGTTAAAACATTCCTTCTTTAAGCAAGCTCGCTCCAGTGATAGTATAGTGAAAAAGCTTTTGGAGGGGTTGCCTGCTTTAGGTGACCGAATGGAGGCCCTAAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGAAAATGCCTGATGGAAAAATGGAGGAATTATCACAGAACGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTTGACGATATGAAGGCTCAGGCTTCCTTGATCCACGATTTCGATGATGCTATGTCGGATATCAACCGTGCAGGAAGTTCAAGTTCTTTATCTACCCTTGATTCACAAGATAAGCAATTGCCAAGCGCAATTCACAAACCTTCTCGATCTGCTGATTTGGAAGAAATTGATGAGATGCGAGTTCCCGTAGTTGATTCTGCAGTAAACGATGCCAAACCTAGATTCGAAAAATCTGATGATGACTCTAGCATCACCAGTTCAAGCCATGAACCACAAACTTTTTCATCCTGTCTCGATGATCATGTGGACAATAATTTGGGTGAAAAATCTGACATGGAAAATGGTGGAAGATCCGTGGAGGGAGTGGCTACTCATTATTATCATAGAAGAGGAAGTTCATCTAGCATCTTACCTGAAGTTACTCTTCCACCTATTCGAGCAGAAAATGAGAAACCACAAAATCTGCCCCAGAACGTTTCAAGTTGCAATGCAATTTCAGTTCCACAGTCAGGAGAGGACGTGCTTACTGAACTTCCTTCTAAAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCAAAGGTGCCAGTTGTACAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTTCTCCTGTACTGCAAAAGAGCCATAGCATGCAGGTTATTAGCCAGCATAATGCTGCTTCTATACATCCAACTTTGCCATTATTACCAGCATCTGATGCCACAACATTAAATCTTTCTGGTTGCTCTCTGTTTCCTGTGTTGCACTCTGTACTGCAGACAAATATTCTTCAAAGGGAGAGCATTTTAAGTTTAATGAAGCAAATTACTGCCGTTGACTCTTCAGATGTTGGTTATGCAATACTGCAGCTTGAAGCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACAGAGTTACAGTGGAGGCTTATCTGTACTCAAGAGGAGCTTCAAAAATTGAAAACAGAAAACGCCCAGATGATAAAAACGGTACTCTCGTCAGAGCAGATTCTTTGTTGA 2085 0.4571 MKETEKKKYPIGAEYYLLYEEIGQGVSASVHRALCVPLNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSEHNLWVVMPFMSGGSCLHILKAAHPDGLEEVIIATVLKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDSIVKKLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAMSDINRAGSSSSLSTLDSQDKQLPSAIHKPSRSADLEEIDEMRVPVVDSAVNDAKPRFEKSDDDSSITSSSHEPQTFSSCLDDHVDNNLGEKSDMENGGRSVEGVATHYYHRRGSSSSILPEVTLPPIRAENEKPQNLPQNVSSCNAISVPQSGEDVLTELPSKVSKSSANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPSPVLQKSHSMQVISQHNAASIHPTLPLLPASDATTLNLSGCSLFPVLHSVLQTNILQRESILSLMKQITAVDSSDVGYAILQLEAAHEREKELLHEITELQWRLICTQEELQKLKTENAQMIKTVLSSEQILC 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0021 694 Pfam Protein kinase domain 19 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0021 694 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Aed2g0021 694 MobiDBLite consensus disorder prediction 410 424 - -
Aed2g0021 694 MobiDBLite consensus disorder prediction 513 539 - -
Aed2g0021 694 MobiDBLite consensus disorder prediction 365 457 - -
Aed2g0021 694 SUPERFAMILY Protein kinase-like (PK-like) 15 278 IPR011009 -
Aed2g0021 694 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 681 - -
Aed2g0021 694 MobiDBLite consensus disorder prediction 425 440 - -
Aed2g0021 694 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0021 694 MobiDBLite consensus disorder prediction 365 383 - -
Aed2g0021 694 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0021 694 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 681 - -
Aed2g0021 694 Gene3D Phosphorylase Kinase; domain 1 4 93 - -
Aed2g0021 694 CDD STKc_OSR1_SPAK 16 277 - -
Aed2g0021 694 Coils Coil 658 685 - -
Aed2g0021 694 Gene3D Transferase(Phosphotransferase) domain 1 97 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0021 Aed-Chr2 237769 244616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0021 5 664 MAP Kinase Kinase Kinase Kinase AT1G79640 65.294 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Aed2g0021 Pkinase 2.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0021 K08835 - gmx:100780339 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0021 2 237769 244616 Aed2g0021 2 237769 244616 ECH