Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0006 ATGCACCACAACCTTAACCTTGCAAGGTTGTGGATTGCTTTGCTTGCAGTCTCAACCACTGTAGTTCATTGCAAAACTGCCTCCCAAGATGTTTCAGCCCTTAATGTGATGTATACCAGCTTAAATTCCCCTTCAAAGCTGAGTGGCTGGAAATCAAGTGGCGGTGATCCGTGCGGCGACTCCTGGGAAGGAATCAAATGCTCTGGCTCTTCTGTCACAGAAATAGATTTATCTGACCTGGGACTTTCCGGTTCAATGGGCTACCAGTTGTCCAGCTTAAAATCAGTTACCTACTTTGATTTGAGCAAGAACAACCTCAAGGATGATATACCATACCAACTTCCTCCAAATGCTCGTTATATAGATCTTTCAAAGAACGACTTCACTGGAAGTATACCTTTTTCCTTCTCTCAGATGGGTGATCTCAACCACCTAAACCTTGCACATAATCAGCTCAAAAACCAGTTGGGCGATATGTTTGGGAAGCTCAGTAAACTCAAACAACTGGATGTATCATTCAATTCACTATCAGGAAACCTACCCCAGAGTCTGAAATCTCTCAAAAACCTCAAGAAGTTGCACCTACAAAACAACCAACTCACTGGTTCAGTAAATGTCCTTGCCAAACTTCCACTTGAAGATTTGAATGTTGAAAACAACAAATTTACTGGTTGGGTTCCTGAGGAGTTGAAGGATATAAATAGCTTGCAAGCCGGAGGAAACTCTTGGTCAAGTGGACCAGCACCTCCTCCTCCTCCTGGTACTCCCCCGAGCAAGGATTCCAAGGAAAATGATGATAAATCTGTTATTAGTGGAGTAGCTATAGCAGGCATAGCTTTTGGCGTACTAGCAGTAATTATAATTGTTGTTGCTCTTTGTAAAAGAAGATCAAGATCATCATCATCAATAACTACTTCACATTTTATTGATGAAGATAGGCGTAGCCAGCATAGATCTTTTACACCCACTGCATCTCAGGAGTTATCAAAAGATTTGGGTGCTGATGTGAGCAAAGACTACAGAGGATTTAAGTCAATGGATTCCACTTCAATTGACGTCAAGGCTTTGCAAAAATCTCCATCAATTGGTGTTAGGTTATCGTCAGTCTCCGATTGTGTGCAATCCTTTAATGACAACGAGTTTGCAAATCGTCTAAATTCTAGAAGAAGCACATCAATCCGTGCAGAGTTGCAGTCTGCTACTGCTAATTTTGCTTCAGGTCGACTTCTTGGTGAAGGATCCATAGGATGTGTTTATCGGGCTAAATATGCTGATGGAAAGGTATTGGCTGTAAAAAAAATCAACCCTTCGCTTTTCCATGGTGGTCCTCCCGAGGAATTCTCTCAGATTGTTTCAAACATCAGCAAACTTCGCCACCCAAATATTGTTGAGCTTGTTGGTTGTTGTTCAGAATCGGAGCACATGTTAATATATGATTATTTCAGAAATGGCTCCCTCCATGACTTTTTACACTTATCAGACGACTTCAGCAAACCACTAACTTGGAACACCAGAGTCAGAATTGCATTGGGAGCAGCTCGGGCTCTTGAGTACCTACATGAAATTTGTTCTCCTCCTTTATTGCACAAGAATATTAAGTCTTCCAATATTCTGCTTGATACGGATCTGAATCCACGTCTCTCAGACTATGGTTTAGCATCCTTCCACCAGCTAAAAGCAGAACAATGTCTGGTTCGTTGGACCACCCCACAGCTTCATGACATTAATGCCGTGGAAAAAATGGTGGACCCTGCCTTGCGGGGGCTTTATCCTCCTAAGTCACTCTTCCGATTTGCTGAAATCATCGCCCTATGTGTTCAATCTGAACCTGAATTTAGGCCACTTGTGTCAGAGTTAGTTCAGGCTTTGGTGCAATTAGTTCAATCGTTCAAGTATGACAATGAGGGAGGATTTTGA 1917 0.4225 MHHNLNLARLWIALLAVSTTVVHCKTASQDVSALNVMYTSLNSPSKLSGWKSSGGDPCGDSWEGIKCSGSSVTEIDLSDLGLSGSMGYQLSSLKSVTYFDLSKNNLKDDIPYQLPPNARYIDLSKNDFTGSIPFSFSQMGDLNHLNLAHNQLKNQLGDMFGKLSKLKQLDVSFNSLSGNLPQSLKSLKNLKKLHLQNNQLTGSVNVLAKLPLEDLNVENNKFTGWVPEELKDINSLQAGGNSWSSGPAPPPPPGTPPSKDSKENDDKSVISGVAIAGIAFGVLAVIIIVVALCKRRSRSSSSITTSHFIDEDRRSQHRSFTPTASQELSKDLGADVSKDYRGFKSMDSTSIDVKALQKSPSIGVRLSSVSDCVQSFNDNEFANRLNSRRSTSIRAELQSATANFASGRLLGEGSIGCVYRAKYADGKVLAVKKINPSLFHGGPPEEFSQIVSNISKLRHPNIVELVGCCSESEHMLIYDYFRNGSLHDFLHLSDDFSKPLTWNTRVRIALGAARALEYLHEICSPPLLHKNIKSSNILLDTDLNPRLSDYGLASFHQLKAEQCLVRWTTPQLHDINAVEKMVDPALRGLYPPKSLFRFAEIIALCVQSEPEFRPLVSELVQALVQLVQSFKYDNEGGF 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0006 638 Gene3D Ribonuclease Inhibitor 25 251 IPR032675 -
Aed2g0006 638 Pfam Protein kinase domain 406 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0006 638 SUPERFAMILY L domain-like 27 238 - -
Aed2g0006 638 SUPERFAMILY Protein kinase-like (PK-like) 387 623 IPR011009 -
Aed2g0006 638 MobiDBLite consensus disorder prediction 303 328 - -
Aed2g0006 638 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Aed2g0006 638 ProSiteProfiles Protein kinase domain profile. 404 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0006 638 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Aed2g0006 638 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Aed2g0006 638 Gene3D Phosphorylase Kinase; domain 1 367 480 - -
Aed2g0006 638 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 559 628 - -
Aed2g0006 638 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 18 557 - -
Aed2g0006 638 MobiDBLite consensus disorder prediction 236 265 - -
Aed2g0006 638 PANTHER OS01G0253100 PROTEIN 559 628 IPR045271 GO:0004714|GO:0006468
Aed2g0006 638 PANTHER OS01G0253100 PROTEIN 18 557 IPR045271 GO:0004714|GO:0006468
Aed2g0006 638 Gene3D Transferase(Phosphotransferase) domain 1 481 559 - -
Aed2g0006 638 Gene3D Transferase(Phosphotransferase) domain 1 560 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0006 Aed-Chr2 95084 100397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0006 7 628 Strubbelig Receptor Gene Family AT1G78980 54.772 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aed2g0006 Pkinase 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0006 - - gmx:100785529 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0006 2 95084 100397 Aed2g0006 2 95084 100397 ECH