Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3161 ATGGTTAAATTGGATGATGATGATTGTTCTAAATCTGATGATAGTAATAATGGGGATGATAGTAATGTTGGTGGTGAAGATAAACCTCAAGATCAAAAGACATCTTATCATGAAGATGTAAGAATAGCTTATTTGACAGGCAATCAGATAAGGTGCCTTCATTTTGGCAATGAAAATCATGCTTTTGATTTCTACAACAAATATGTTAGATGTCATGGTTTTGTTATCAAGAAAGATGATATATGTCAAGATTTGAAAGGGAGAGTTATAAAGCGTAATTTTGTATGCAATAGAGAAGGACTGAGAAGTAGAAAACACTTCACGAGGGTGGATAGAAAAAGAGACCTATCACTCCTACTAAATGTGCAGCTAAGCTTCACATCAAAATGGAAAGTTTCTTCATTCCATGAGACTCACAACCATGAACTCACTCCAACCACGGATGTACATCATATTCCTAAGTATTGGGTGTTGACTGATGCAAATAAAAGCCAGGTGGACAATCTTCATACATTTGGTGTTCGAACTTGCCACATTATGGGATATCTATTGGCTCAAAAGGGTGGATATAGTGGCATTAGTTTTGAAAAAAAGGGTCAAGAAACACCGAAAACGGATAAGAAAAACGTGAAAAACAAACATGAGAAAATCGGTTTGAAGACACAATTCGGCAATGCAGAAAGAACAAGGAAAAAGGAAAATGTGAAAGAAAGAAAATCAATTAGGCACCACAAACAACGATGTTTGATAAGCTTATAG 759 0.3544 MVKLDDDDCSKSDDSNNGDDSNVGGEDKPQDQKTSYHEDVRIAYLTGNQIRCLHFGNENHAFDFYNKYVRCHGFVIKKDDICQDLKGRVIKRNFVCNREGLRSRKHFTRVDRKRDLSLLLNVQLSFTSKWKVSSFHETHNHELTPTTDVHHIPKYWVLTDANKSQVDNLHTFGVRTCHIMGYLLAQKGGYSGISFEKKGQETPKTDKKNVKNKHEKIGLKTQFGNAERTRKKENVKERKSIRHHKQRCLISL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3161 252 Pfam FAR1 DNA-binding domain 63 144 IPR004330 -
Aed1g3161 252 MobiDBLite consensus disorder prediction 1 35 - -
Aed1g3161 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 49 236 - -
Aed1g3161 252 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3161 Aed-Chr1 30542298 30543076 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed1g3161 FAR1 5.1e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3161 - - ccaj:109792835 181.03