Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3140 ATGGATAAGAAGGGCTGGTTTAGCATGATTAAGAAGCTCTTTTTATGGGACACACAGTCCTCACAAGAGAAGAAGGAGAAAAGAAGAAGGGCTTGGATATTTGGGAGGGCTAAGACCAAGAGATTGTCTTCAATTACAGCTCCACCACCTTCAAAAGAAACAAGAGTACTAAGTGAAGCAGAGGAAGAACACAGCAAGCATGCTTTAACAGTGGCCATTGCTTCGGCTGCTGCTGCTGAAGCTGCTATTACTGCTGCTCAGGTTGCTGTTGAGGTTGTTAGGCTCCAATCTGAATCTGCTCATCAACAACTTAAAGGAAAACAAGAACAACTTCAACCTGTTAAAATTAGCCATGATGCTCCTCATTCCACACACCAACGCCAGAGGAAGAAGATTCATGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGTTACCTTGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATAATTCGTGGAAGAGCTGTGAGACGCCAAGCATTGAGTACTCTAAAGTGCTTGGAGTCAATAGTAAGTATCCATTCACAAATGGTTGAAGGAAGATGGGATTGTGGTGAAAAAGAAGAAGAGATGCAAAGTTCAAGGGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAAGGTGGGATGAGAGCATTTTGTTGAAGGAAGATGCCTCTTGCCAATGGGTAGACACACAACTTTCTAAGAGTAATGAACTTGAAGATTTAGACTCCGTTTTCAGCTCACATTATTCTAGACCTGGGGAGCAATGTGGAAAGAGACAACTAAAGCTTAGAAATATTCAGAGACAAAATCAAGTTGAAGGATTAGATTCCCCATCACTTGCTTCAAGAAACTCTTTTCCCCACAGGAGCCAGACATCAGAGGCAGAAGATCACTCAGTTCCAAGCTCTCCTGCAATTCCTACATACATGACAGCAACAAAATCAACACAAGCAAAAGCAAGAACAACAACCTCCCCAAGAGTAAGGATAGGAGGGAATTTTGACATCAACTCTGATAGCCCTTCACCATGCAAGAAAAAGTCACCCATTGTGACTTCTATTAATAGTGAGGTGCTTAGTAGTGGTAGAATGGGCAAGCTCAATAGTAATCAAGAAAGATCTCCTAGCTTAAAGGGCCTTCTAAGACCTCTATAA 1188 0.4184 MDKKGWFSMIKKLFLWDTQSSQEKKEKRRRAWIFGRAKTKRLSSITAPPPSKETRVLSEAEEEHSKHALTVAIASAAAAEAAITAAQVAVEVVRLQSESAHQQLKGKQEQLQPVKISHDAPHSTHQRQRKKIHESSAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQALSTLKCLESIVSIHSQMVEGRWDCGEKEEEMQSSRDKIIRMDSNSERRWDESILLKEDASCQWVDTQLSKSNELEDLDSVFSSHYSRPGEQCGKRQLKLRNIQRQNQVEGLDSPSLASRNSFPHRSQTSEAEDHSVPSSPAIPTYMTATKSTQAKARTTTSPRVRIGGNFDINSDSPSPCKKKSPIVTSINSEVLSSGRMGKLNSNQERSPSLKGLLRPL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3140 395 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Aed1g3140 395 PANTHER IQ-DOMAIN 5-RELATED 237 394 - -
Aed1g3140 395 PANTHER IQ-DOMAIN 11 237 394 - -
Aed1g3140 395 MobiDBLite consensus disorder prediction 280 300 - -
Aed1g3140 395 Pfam Protein of unknown function (DUF4005) 304 389 IPR025064 -
Aed1g3140 395 PANTHER IQ-DOMAIN 5-RELATED 1 224 - -
Aed1g3140 395 MobiDBLite consensus disorder prediction 280 395 - -
Aed1g3140 395 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Aed1g3140 395 Pfam IQ calmodulin-binding motif 135 154 IPR000048 GO:0005515
Aed1g3140 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 176 IPR027417 -
Aed1g3140 395 MobiDBLite consensus disorder prediction 307 387 - -
Aed1g3140 395 SMART iq_5 132 154 IPR000048 GO:0005515
Aed1g3140 395 Gene3D - 133 183 - -
Aed1g3140 395 PANTHER IQ-DOMAIN 11 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3140 Aed-Chr1 29851097 29853391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3140 3 395 IQD Protein Family AT5G13460 36.093 1.25e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3140 - - gmx:100777067 574.704