Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3122 ATGGGACCCGCGGTTGCAGACGAAAATCCAAAACAGGGGCAAAAAGGAAACTCTATCTCTAAATGCACAGAGAACAACAAGGAGCCATGCAAAGTTGCCCTGGATGGCTCAAAAGTGTACAACAAGAATTATAGTACACTTACAAATCTTTCTTGCAGTATGAAGCGAACAATTTCAAGATACAACAAATGCCTTGGTTCTACAGATGCTGCGGTAGCAGAAATTAAGACGCAGAAGGAAGATTCTAAGATGGTGGAGATTCTAAGAGAGGAAATTGAAAAGCTAGAAACAAAGCAATTACAGTTATTGGGTAAGGATCTAACAGGATTAGGTTTAAAGGAGTTGCAAAATTTAGAGCAACAACTTAATGAGGGGTTATTGTCTGTCAAGGCGAGAAAGGAGGAATTACTCATGGAGCAACTGGAGCAATCTAGAGTTCAGGAACAGCAGGTTATGTTGGAGAATGAAACCTTGCGCAGACAGGTTGCCTGCTGGTGTTCAAGAAGAAGCCAACCAAGAAAGAAACCTTTTCAAATGACTCACCCTAGTTCTCTGATTTTTGTATTTCAACTGGGAAAATAG 582 0.4072 MGPAVADENPKQGQKGNSISKCTENNKEPCKVALDGSKVYNKNYSTLTNLSCSMKRTISRYNKCLGSTDAAVAEIKTQKEDSKMVEILREEIEKLETKQLQLLGKDLTGLGLKELQNLEQQLNEGLLSVKARKEELLMEQLEQSRVQEQQVMLENETLRRQVACWCSRRSQPRKKPFQMTHPSSLIFVFQLGK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3122 193 MobiDBLite consensus disorder prediction 1 24 - -
Aed1g3122 193 Coils Coil 78 105 - -
Aed1g3122 193 Pfam K-box region 76 162 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed1g3122 193 ProSiteProfiles K-box domain profile. 78 168 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed1g3122 193 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL15 51 152 - -
Aed1g3122 193 PANTHER MADS BOX PROTEIN 51 152 - -
Aed1g3122 193 Coils Coil 112 135 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3122 39 162 MADS-box Gene Family AT5G13790 46.774 6.91e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3122 - - gmx:547732 173.326