Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3109 ATGAAAGGGGCTACTTATAAATTCTATTATGCTTATGAAAGGTTCATTGATTTTGTGATTTGGAAAGATGAGGTTTGTTATGGGTCAAATGGTGAAGTAATACAACGTCAATATGTATGCAACAAAGTGGGATTGAGGAACAAAATACATTTTATGAGGAATGATAGGAAAAAGGCTCATAAACCTTTGACTCGCACTAATTGCATAGCAAGGTTGCACGTGAAGTTAGATCCAAGTACCTCGCAATTCAAAGTTGTGTCATCTTGGGAAAGTCATAACCATTTGACAAATGTTTTACAACAACAAGGGCACATGCATAATAGTGATAGTTCTGTTGTAAATGAGGTGGGCGATTTGAATATAGTTAAGACAAAAGATGCTCCACGAGGAAAAAACAACCGGAAGCATAGAAAATACTCTACTTGTTAG 429 0.359 MKGATYKFYYAYERFIDFVIWKDEVCYGSNGEVIQRQYVCNKVGLRNKIHFMRNDRKKAHKPLTRTNCIARLHVKLDPSTSQFKVVSSWESHNHLTNVLQQQGHMHNSDSSVVNEVGDLNIVKTKDAPRGKNNRKHRKYSTC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3109 142 MobiDBLite consensus disorder prediction 123 142 - -
Aed1g3109 142 Pfam FAR1 DNA-binding domain 7 94 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3109 Aed-Chr1 28866297 28867861 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed1g3109 FAR1 2.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3109 - - ccaj:114916730 84.7297