Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3107 ATGGGAAGTTACTGCAGTGATAGGGAACAAGACATGGATGATTCTGATTCCATGGAGTGGGAGGAGGAGGAGGAGCGGTTGCGCGGATTCGATCACGATGAGGATGCTGATTCCTCTGTGTACAGAGAGGATCAGGACAATGACTCAAAAGTTGAGTCCTCATCAGAGAGTTCTCATGATGTGTTGTCAGTGACATGGTTAGATGATATCCTTGGTGGCTATTATGAGGACTTTCTGGTTGATGAAACACTCAAAGAGGCCAATTCAGAAGAAGACACAAGTGGAAGCAATGAAACTCAAGAAATTGAGTACTCCTCCAAAGGTATGGTTTGTGACCAATCTTCTTTCCCAGAGGAAACATTTGAGTGCCTGACAAATGCTCAAGATAGTGGTGGTGAAAATGAGAAACATGAGGATGATGAAGCCAGATGCAACACAAAATTGAAGAATACTCAATGTCAGAAGATGAGTGAAACTTGCAAAGTTGAAGAGACAAATGAAGATGAATACTCAAGAAGCCTAGAGAACAATGATGATGAGAGCAACAAAGTGGAGAGCCAAATTGAGTTGGAGGATGTGTCTGAAGAGAGTAACATAACAGCTGAAGATCATGATTTGATGGAAAAAGATCAACATGGCAAAGATAGAAGGTTCAAAAGCAAATGTTGCATAGGTGGTGAAGATGAAGAGGAAAACACAAGCAAGAATTGGAAAGATGCAATTAGGAGAAAGAGGGATGTTGAAGATCATGATGAAATTGGAAAGTTCAACCCGAAAGAGCCAAATTTTCTTCCTTTAGATCCGGAGCCGGGACAGGAAAAAGTTGACCTGAGGCATCAAATGGTGGATGAGAGAAAGAATGCAGAAGATTGGATGCTTGATTGTGCACTAAGACAAGCTGTGACAAAGCTTGCTCCAGCTAGGAAGAGGAAAGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTAATGCCAGCAGCAGCACCCAAATGTGAAACACGTGTGAGGAACAACAATGCTGCATTTGGCCATTCGGGAAGAGTTCAAGCTTGTAGCTGA 1056 0.4271 MGSYCSDREQDMDDSDSMEWEEEEERLRGFDHDEDADSSVYREDQDNDSKVESSSESSHDVLSVTWLDDILGGYYEDFLVDETLKEANSEEDTSGSNETQEIEYSSKGMVCDQSSFPEETFECLTNAQDSGGENEKHEDDEARCNTKLKNTQCQKMSETCKVEETNEDEYSRSLENNDDESNKVESQIELEDVSEESNITAEDHDLMEKDQHGKDRRFKSKCCIGGEDEEENTSKNWKDAIRRKRDVEDHDEIGKFNPKEPNFLPLDPEPGQEKVDLRHQMVDERKNAEDWMLDCALRQAVTKLAPARKRKVALLVEAFETVMPAAAPKCETRVRNNNAAFGHSGRVQACS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3107 351 Pfam Plant calmodulin-binding domain 217 324 IPR012417 GO:0005516
Aed1g3107 351 MobiDBLite consensus disorder prediction 93 107 - -
Aed1g3107 351 MobiDBLite consensus disorder prediction 197 213 - -
Aed1g3107 351 MobiDBLite consensus disorder prediction 125 147 - -
Aed1g3107 351 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 9 351 - -
Aed1g3107 351 SMART CaM_binding_2 209 324 IPR012417 GO:0005516
Aed1g3107 351 MobiDBLite consensus disorder prediction 85 107 - -
Aed1g3107 351 MobiDBLite consensus disorder prediction 162 190 - -
Aed1g3107 351 MobiDBLite consensus disorder prediction 1 63 - -
Aed1g3107 351 MobiDBLite consensus disorder prediction 22 55 - -
Aed1g3107 351 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 9 351 IPR044681 GO:0005516
Aed1g3107 351 MobiDBLite consensus disorder prediction 162 213 - -
Aed1g3107 351 MobiDBLite consensus disorder prediction 131 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3107 Aed-Chr1 28830617 28831672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3107 229 350 Calmodulin-binding Proteins AT2G38800 48.361 1.82e-29 117