Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3065 ATGAAGGCTTTTGCAACTATGCCAAACCAAGCCATCATAACACAAAATGTTAATAATGGTCTGCTTTTTCTTCTTCTGTCTGATTTCCTTTATGAAACCCTGAAGGCTGAAACTGTGACTCTGTTAGTTGTGAATCCATTAGGCTTTGTGCAGCATCATAGAGGGATTAATAACCAGAGCTTTGATAACAAGAAGCTTGTAGGAATACTAGTAGGCATTGGTGCATTCATCGTGGTACTTGGATTGGTCACATTCACATATATGAAGAGGAAGAAGCTCTCAATGACAGAGATGCTAAAAGTATTTCACTTGAAGTACAAAGGGGAGAAGGAAGATGTGGAGTTATCAACAATATTTGATTTTTCAACCATTTCTAATGCTACAAATCACTTTTCACCCAGAAACAAGTTAGGAGAAGGTGGCTTTGGACCAGTATACAAGGGTGAATTGAAAGATGGACAAGAGATTGCAGTCAAGAGGCTTTCAAAAACTTCTGAGCAAGGAGCAGAGCAGTTCAAAAATGAAGTAATGTTGATGGCAAAACTTCAGCACCGCAATCTTGTAAAACTTCTTGGTTGTTCTATTCACCAAAAAGAAAGGCTCTTGATCTATGAATACATGTCCAACAGAAGCTTGGATTACTTCATTTTTGGTTTGAAATTTCACCCTATGCAAATTTTGGCTATTCATTTTGCTCTTGCTATTTTGTAG 711 0.3755 MKAFATMPNQAIITQNVNNGLLFLLLSDFLYETLKAETVTLLVVNPLGFVQHHRGINNQSFDNKKLVGILVGIGAFIVVLGLVTFTYMKRKKLSMTEMLKVFHLKYKGEKEDVELSTIFDFSTISNATNHFSPRNKLGEGGFGPVYKGELKDGQEIAVKRLSKTSEQGAEQFKNEVMLMAKLQHRNLVKLLGCSIHQKERLLIYEYMSNRSLDYFIFGLKFHPMQILAIHFALAIL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3065 236 ProSiteProfiles Protein kinase domain profile. 131 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g3065 236 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 50 218 - -
Aed1g3065 236 SUPERFAMILY Protein kinase-like (PK-like) 113 224 IPR011009 -
Aed1g3065 236 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 50 218 - -
Aed1g3065 236 Pfam Protein tyrosine and serine/threonine kinase 135 216 IPR001245 GO:0004672|GO:0006468
Aed1g3065 236 Gene3D Phosphorylase Kinase; domain 1 103 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3065 Aed-Chr1 27212732 27217195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3065 105 223 Receptor kinase-like Gene Family AT4G21400 57.851 1.50e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g3065 PK_Tyr_Ser-Thr 5.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3065 - - gmx:100803275 287.73