Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3064 ATGGGTTCCAATTGGGAACAGAATTCAGCTGAGGAAAACAATGCATGCATCTGTGCAATGCAGCATTGTATTGGTTCGATAACATATTTTGCAGTATTGAAGGCTGCCCTTGAACTCAACTTGTTTGAGATCATAGCAAAGGCATCATCATCATCATCCCCACTTGGTGTCTCAGCATCTGATGTTGCTTCTCAACTCCCAACACAACATCCTGAATTGCCTCGAAGGCTTGATCGCATGCTGTGTCTACTTGCGAGTCACTCTCTTCTTACTTGTTCCACTCGCACCAATGAAGATGGTCACACTACTCAAAGGCTTTACCAGCTATCACTTGCTGGTAGATATTTTGTCAAAGATGAGCACAATGGCTCTTTAGCTTTCCTATCCACTTTTCTTAATTATGTGAATTGTAAAAACCTCAATTTTAAGGAGATATTTCTAGAGTTTGACAAGGGTGTATTTGAGAAAGTTCACGGAGTGCCTATTTATGAAGGCATAGAGTCAAATCCGACATTGAATAAGGTTTTTAACGAAGCAATGACTAATCTAGGCACAATCACGATGAAGTGGTTACTTGAAATATATACAGGATTTGAAGATATATCGTTGCTAGTTGATCAACTAGAAGGAGACATGTTTAAAAGTGTTCCAAAAGGTGACGCTATCATATTGAAGTCCGTGTTGCACAATTGGTCCGTTGAAAAATGTTTACAAATTTTAAGGAATTGCTACAAAGCTTTGCCACAAAATGGGAAAGTAATCGTTGTGGACATCATAGTGCCCGAAACAATTCACTCAACTGAACCCGATAAATTGATTACTGGCTTTGACAACCTCATGTTCTTGGATGGTGGGATCGAAAGAACTGAGAAAGAATTTGAGAATTTATGTAAACTTTCGGGATTTTCTGGTTTTCAAGTTGCAAGTCGTGTCTTCTCTACTCTAGGAGTGATAGAATTTCGTAAGTGA 969 0.3901 MGSNWEQNSAEENNACICAMQHCIGSITYFAVLKAALELNLFEIIAKASSSSSPLGVSASDVASQLPTQHPELPRRLDRMLCLLASHSLLTCSTRTNEDGHTTQRLYQLSLAGRYFVKDEHNGSLAFLSTFLNYVNCKNLNFKEIFLEFDKGVFEKVHGVPIYEGIESNPTLNKVFNEAMTNLGTITMKWLLEIYTGFEDISLLVDQLEGDMFKSVPKGDAIILKSVLHNWSVEKCLQILRNCYKALPQNGKVIVVDIIVPETIHSTEPDKLITGFDNLMFLDGGIERTEKEFENLCKLSGFSGFQVASRVFSTLGVIEFRK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3064 322 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 206 - -
Aed1g3064 322 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 205 322 - -
Aed1g3064 322 PANTHER O-METHYLTRANSFERASE 14 206 IPR016461 GO:0008168
Aed1g3064 322 PANTHER O-METHYLTRANSFERASE 205 322 IPR016461 GO:0008168
Aed1g3064 322 Gene3D Vaccinia Virus protein VP39 127 206 IPR029063 -
Aed1g3064 322 Pfam Dimerisation domain 32 85 IPR012967 GO:0046983
Aed1g3064 322 SUPERFAMILY "Winged helix" DNA-binding domain 11 120 IPR036390 -
Aed1g3064 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 150 320 IPR029063 -
Aed1g3064 322 Gene3D Vaccinia Virus protein VP39 207 310 IPR029063 -
Aed1g3064 322 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 205 322 IPR016461 GO:0008168
Aed1g3064 322 PIRSF O-mtase 205 322 IPR016461 GO:0008168
Aed1g3064 322 PIRSF O-mtase 1 208 IPR016461 GO:0008168
Aed1g3064 322 Pfam O-methyltransferase domain 206 303 IPR001077 GO:0008171
Aed1g3064 322 Gene3D - 2 116 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3064 Aed-Chr1 27150059 27152868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3064 1 322 Monolignol Biosynthesis Gene Families AT5G54160 37.566 2.89e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3064 - - gmx:100784030 385.185