Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3030 ATGCCAGATGTTCAAGCCCTTGTTAACGATTTTGTGAATCTTCTTAAGAAACGTAAAATTGAAGGGTCTCTGGTCACAGCAAAGCAGACAGCAGTGTTGCTCCGATCTGTGATTTCGCAGCAGCAGGTGCCACACACAAACCAGGCCACAGTTCTGATTAATGCAGAAAATCTTTCCCTTGCGGCGGATGCTATGGCTGATTTGGAGATGTCTGCTCGAAGTGATGATGAGGATGATGAGGAGCGAGATGATCATCCTGCTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCCCTGTCATTGCAAACTCTTCTAGAGGATGTGAATGATCTAGCTGCTGTTCTACCAACACCTTCCTCAGGAGGGGGTGACTCTGAAGGGAAAACTGTTGAAAAGGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAATCAATGAACTTATTCAAGATATAACCTCTTGCCATGAACAAATAGCAGAGCAGGCAGTAGAGCATATTCATCAAAATGAGGTAATATTAACACTAGGCAGTTCAAAAACAGTGTTGGAATTTCTTTGTGCTGCAAAGGAGAGAAAGAGATCATTTAAGGTTGTTGTCACTGAAGGTGCCCCAAGATATCAGGGGCAACTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTAATTGCTGATTCTGCAACTTTTGCTATGATTTCCCGAGTGAATATGGTTATAGTTGGCGCTCATGCTGTCATGGCTAATGGTGGAGTAATTGCCCCAGTAGGGTTACATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCATAAGTTGTGCCCTTTGTATCCGCACAATCCTCAAATCCTACTGAATGAGCTGAGATCCCCATCCGAGCTACTTGACTTTGGGGAATTCTCAGATTTGATGGATTCTGCAGCTGGTGCTGGTTCTCTTCATGTTGTAAATCCAGCATTTGATTATGTGCCACCAAACCTTGTTAGTCTTTTTATCACTGACACTGGAGGGCATAACCCGTCATATATGTACCGGCTCATAGCTGACTACTACTCTGCTGATGATTTGGTAGTGAAACAAAGACCCACTACAGGGAGTTGA 1143 0.4471 MPDVQALVNDFVNLLKKRKIEGSLVTAKQTAVLLRSVISQQQVPHTNQATVLINAENLSLAADAMADLEMSARSDDEDDEERDDHPALSAAAVAAAARSTLRPLSLQTLLEDVNDLAAVLPTPSSGGGDSEGKTVEKGRKLKHDVIEAINELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKERKRSFKVVVTEGAPRYQGQLLAKELAARGLQTTVIADSATFAMISRVNMVIVGAHAVMANGGVIAPVGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQILLNELRSPSELLDFGEFSDLMDSAAGAGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKQRPTTGS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3030 380 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 57 372 - -
Aed1g3030 380 Pfam Initiation factor 2 subunit family 96 354 IPR000649 GO:0044237
Aed1g3030 380 PANTHER BNAA01G32370D PROTEIN 57 372 - -
Aed1g3030 380 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 369 IPR037171 -
Aed1g3030 380 Gene3D - 159 364 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3030 Aed-Chr1 26313250 26320730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3030 1 372 Eukaryotic Initiation Factors Gene Family AT3G07300 69.024 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3030 K03754 - gmx:100807877 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g3030 1 26313250 26320730 Aed1g3030 1 26313250 26320730 ECH