Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3024 ATGGGAAATGCATTTCAAAATAGTCGGGGAAGAAAAGATTCAAAGAAGAACCACACAATGGCAGGTGCAGGTATGATTGAATTTGTTGGGTTGATCAAAGTCAATGTGGTAAAAGGCACTAACCTTGCTATTCGTGATGTAATGAGTAGTGACCCTTATGTCATCATATCTCTTGGTCACCAATCAGTGAAGACACGTGTCATAAAGAGTAGTTTAAATCCAGTTTGGAATGAGATCCTAATGTTGTCCATACCTGATTACATTCCTCCTCTTAAAGTGGTAAGTTGA 288 0.3854 MGNAFQNSRGRKDSKKNHTMAGAGMIEFVGLIKVNVVKGTNLAIRDVMSSDPYVIISLGHQSVKTRVIKSSLNPVWNEILMLSIPDYIPPLKVVS 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3024 95 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 28 93 IPR035892 -
Aed1g3024 95 Pfam C2 domain 31 90 IPR000008 -
Aed1g3024 95 Gene3D C2 domain 12 94 IPR035892 -
Aed1g3024 95 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 1 94 - -
Aed1g3024 95 ProSiteProfiles C2 domain profile. 12 95 IPR000008 -
Aed1g3024 95 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 94 IPR044518 GO:0005096|GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3024 Aed-Chr1 26093821 26099335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3024 17 93 C2H2 Transcription Factor Family AT4G05330 58.442 3.14e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3024 K12486 - gmx:100799376 150.984