Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3023 ATGCAGCATGTGTACGACAAGGATACTTTCACAACTGATGATTTTATGGGTGAGGCTGAAATTGACATTCAACCTTTAATTTCAGCTGCAAAGGCATATGAAAAATCTTCAATCAATGAATCAACACAGCTTGGAAAATGGGTAGCAAATGGTGATAACGGTCTTGTTAAAGATGGTATCATCTCCCTTGAAGATGGGAAGGTCAAACAAGAGATCTCAGTGAGACTACAACATGTTGAGAGGGGAGTGCTAGAGATTGAACTTGAATGTGTTCCTCTAACTCAGTAG 288 0.3958 MQHVYDKDTFTTDDFMGEAEIDIQPLISAAKAYEKSSINESTQLGKWVANGDNGLVKDGIISLEDGKVKQEISVRLQHVERGVLEIELECVPLTQ 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3023 95 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 81 IPR035892 -
Aed1g3023 95 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 4 95 IPR044518 GO:0005096|GO:0005543
Aed1g3023 95 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 4 95 - -
Aed1g3023 95 Gene3D C2 domain 2 95 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3023 Aed-Chr1 26090048 26090335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g3023 3 95 C2H2 Transcription Factor Family AT4G21160 53.763 7.77e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g3023 K12486 - gmx:100799376 171.014