Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2989 ATGTGGACCAAATGCTCACTGCAATGTGACAAATTTCCCTCCCTGCAGTTGCTTGGGTGGATTTGTGCAGAAAAGAAGCAAGGGGCTGTTATCATAAGCTGTGTGTTGTCTATTGTAATTATAAGCCTATGCTTAACCTATAGACAGTGGAAGACAATGCGGAATGGCAATAATAGTTATATGCCGCCAGAGTATATAATTGATGGAGCTTATTCAACAAAGTCAGATGTTTTCAGCTTCGGCGTGTTGATATTGGAGATAGTGAGTGGGAAGAGAAATAGAGGATTATATCATCAAGATAATCTTCTGGCACATGACACATGTAAGCATGAACTTGAATTTTGGCCATCTTTGACATATCATTCTACATTTTGTTTTTGTCCTACGGACATTCTTCAACCCTCTGCACCAAAGACTAATCCTACTAGCTCAAAGAATTTTCACAAATGA 450 0.3889 MWTKCSLQCDKFPSLQLLGWICAEKKQGAVIISCVLSIVIISLCLTYRQWKTMRNGNNSYMPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNRGLYHQDNLLAHDTCKHELEFWPSLTYHSTFCFCPTDILQPSAPKTNPTSSKNFHK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2989 149 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 56 106 - -
Aed1g2989 149 Gene3D Transferase(Phosphotransferase) domain 1 25 141 - -
Aed1g2989 149 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 56 106 - -
Aed1g2989 149 SUPERFAMILY Protein kinase-like (PK-like) 48 110 IPR011009 -
Aed1g2989 149 Pfam Protein tyrosine and serine/threonine kinase 51 93 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2989 Aed-Chr1 25477359 25487058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2989 56 119 Receptor kinase-like Gene Family AT4G23230 51.562 2.54e-15 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g2989 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2989 - - gmx:100795006 91.6633