Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2973 ATGGCTGCTGCATGGAAGAAGTTGGCAATTTTAGGGAAGGGTTCTTTTGCTACGGTTTATCTTGCTACTGTTTCTCTTCCACAAGAAGAACCGAATGAGAATGAGAAGGTTGTGGCCGTGAAGAGTTCAAGTCATTTCTTTTTTTCAATTGTTTCAATGCAGAAAGAAAAGAGAATCTTGGACTCGTTCATTGGTTGCAAAGAAATCCTTCAATGCTATTTCGACGAATTAATTGTTGATGAGAGAAACTATTTCACTTATAATCTTTTCATGAAGGTTGCACCTTACGGTTCTCTTGATAATTTAATAAAGAGGAAGGGGTCACTGTCGGAGAATGAAGTGAGACTCTACACTATCATGCTTCTCAAAGGGCTTTCTTGCATTCACCAAAAGGGAGTTGTTCATTGTGATCTTAAACCAGACAACATTCTTCTCTTTCCTAATTCATCTGAAGAGAAAGATGATCATGAAATGTTGTTTCAACTGAAGATTTCTGATTTTGGAATGTCCAAGACTAAAGAAGATCGTTCAAACGATGCTGACTATAAGAAGATCAAGTTTAGAGGGACGCCTTATTACATGTCACCAGAATCGGTTGTTGGTGTGATCAAACCGGCATTGGATATATGGTCTCTTGGATGCATTGTGATTGAGATGATGACCGGATTGCACGCATGGAACCTGATAACGAAAACGAAAGAGGAGATAATGTACAAGCTTTTAGTTCTTGAAGAAGCACCAAAAATACCCAATGGACTGGATTGGGTTTGCAAGAATTTCTTGAGCAAGTGTTTTATGAAGGATCCTAGTCAGAGATGGACTGCTACAATGCTTCTCAACCATCCTTTTCTCTGTAATGGATCTAACATGCAACAAAGTTCATCATCCTTTTTCTCATGA 900 0.3856 MAAAWKKLAILGKGSFATVYLATVSLPQEEPNENEKVVAVKSSSHFFFSIVSMQKEKRILDSFIGCKEILQCYFDELIVDERNYFTYNLFMKVAPYGSLDNLIKRKGSLSENEVRLYTIMLLKGLSCIHQKGVVHCDLKPDNILLFPNSSEEKDDHEMLFQLKISDFGMSKTKEDRSNDADYKKIKFRGTPYYMSPESVVGVIKPALDIWSLGCIVIEMMTGLHAWNLITKTKEEIMYKLLVLEEAPKIPNGLDWVCKNFLSKCFMKDPSQRWTATMLLNHPFLCNGSNMQQSSSSFFS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2973 299 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 292 - -
Aed1g2973 299 ProSitePatterns Protein kinases ATP-binding region signature. 11 41 IPR017441 GO:0005524
Aed1g2973 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Aed1g2973 299 SUPERFAMILY Protein kinase-like (PK-like) 5 289 IPR011009 -
Aed1g2973 299 ProSiteProfiles Protein kinase domain profile. 5 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2973 299 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 292 - -
Aed1g2973 299 Gene3D Transferase(Phosphotransferase) domain 1 1 298 - -
Aed1g2973 299 SMART serkin_6 5 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2973 299 Pfam Protein kinase domain 6 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2973 Aed-Chr1 25240923 25241822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2973 5 284 MAP Kinase Kinase Kinase AT3G50310 39.437 8.28e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed1g2973 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2973 - - gmx:102664043 417.927