Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2970 ATGTATGGGAGTAAGGCTTGCCAACTTGTGAAAGAATTTGCAAATGGAGAAAAGGGTCAGCTTACCTTGTACAATAATGACTTGTTTCGAGAAGTAGTTGCAGAATGCACTCAACATCACCTTGATTTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATATCCAAACGGCAAAAAATGCAGATCACTATGGAGCCCTTATCCACCATCTTGCTTTAGTCCGAAATAAGCGTTGCCTAATGGCCTATATTTATAATCGAGCAGAAATTATACGAAACTTGATATGGAAGATAGGGCCTGTGCTTCCCCAAGAAATTAAAGGCAAGCTTTGTAATACAGAAGAAGAACATTTCAAGATGCATTCTAAAGCATTGAAATCTTATATGTTGAAAGTGGACGTTGATTTGACTGTGGTAATCTTTCCCTCTCCTTACCCCATTTCATTCCCTTCTCCCTCACCCGCTAGCACACATGCACCTGTTTACACTCACGATATGGTACCGCCAAAAGATCCTTACATCAAAGTAAGGGTCATTGATGACATTGGAGAAGACATTCTGATAAGTGATGATAGTAAGAGTGCCAATTTTGCCCTCCATTCAATGCACCTTCTGAAGCGAACTGATGCAGAGAAATATATCTCACAGGTTAAGTTGTCTTTCTGCTTTAAGATTTATATTGCAAAATATTTAGTATAA 705 0.3901 MYGSKACQLVKEFANGEKGQLTLYNNDLFREVVAECTQHHLDFQSLIRKMQEEGLDIQTAKNADHYGALIHHLALVRNKRCLMAYIYNRAEIIRNLIWKIGPVLPQEIKGKLCNTEEEHFKMHSKALKSYMLKVDVDLTVVIFPSPYPISFPSPSPASTHAPVYTHDMVPPKDPYIKVRVIDDIGEDILISDDSKSANFALHSMHLLKRTDAEKYISQVKLSFCFKIYIAKYLV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2970 234 CDD GINS_A_psf1 3 135 IPR005339 GO:0000811|GO:0006260
Aed1g2970 234 PANTHER PARTNER OF SLD5 165 220 IPR005339 GO:0000811|GO:0006260
Aed1g2970 234 PANTHER PARTNER OF SLD5 1 145 IPR005339 GO:0000811|GO:0006260
Aed1g2970 234 SUPERFAMILY GINS helical bundle-like 1 144 IPR036224 -
Aed1g2970 234 Gene3D - 1 133 - -
Aed1g2970 234 Pfam GINS complex protein 21 105 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2970 Aed-Chr1 25208317 25211097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2970 1 222 Core DNA Replication Machinery Family AT1G80190 56.889 5.67e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2970 K10732 - gmx:100780798 338.576