Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2965 ATGGACACCAAGCTACTAACAATCCGCACTCTGGTCTCCGGCCTCGGCTCCTCCTCCGACCAAACCCGCCTCGCCTCCCTCCGCCACCTACGCCGCACCTCCGCCGAAGACCCCGCCGCACGCCCCCTCATCTCCGCCGCCGGCGCTGTCCCCCTCCTCGCCTCCGCCCTCTACTCCCCCTCCCACCCCATCCAGGACCACGCCGCTGCCACCCTCCTCAACCTCTCCATTTCCGACCGCCGCCCCCTCGCCGTATCCGCCACCCTCCCGGACGCCCTCGCTCACCTCCTCTCCCGCCACGCCACCTCCTCCGCCGCCTCTGCCGTACAGTCCGCCGCCGCCACCCTCCACAGCCTCCTTGCCGTCGTCCCCGAGTTCCGCCACGTAATCAGCTCAAAACTCGATATCCTCCGGGCCCTCGTCGGCATAATCAGTCATCCTAATTCACCGACGAGGTCCGTGAAGGACGCCCTCAAGGCGTCCTTCGGAGTGGCCCTCCACCCGCCGAGCCGGATCATGCTGATCCGGCTCGGCGCGGTTTCCGTCCTCTTTGCTGTCATAGCGAAGGACAAGGATGGAAAACGGAGGGTCGGCTTAATCGAGGACGCTACCGCGGTGATCGCGCAGGTGGCGGCCTGCGAGGAGAGCGAGGAGGTGTTCCGGAAGTTGTCGGGGGTTTCAATTCTGGCCATGATGTTGGGTTCGGAGAGTGGGAGCTGCAGCTTGAGAACGAAGGAGAATGCGGTTGCGGCACTGTTGAATTTGGTTAGGTGTGGGAGTGAGAAGGTTTTTGAAGAGGTTAGGACCAAAGTTGGGGGTTTGGATGGGATCTGCTATGTGCAGGAACACGGTAGCCCCAAAGGGAAGAGCAAAGCCGTGGCGTTTTTTAAGCTCTTGCTCGATGGTGGTGGAAGCAACAGTGATGAAAATGTTCAAGATTTGTATCCCGTTGACTCTGAATCGGGATCAAGTTGCAGTGCTTAA 984 0.6138 MDTKLLTIRTLVSGLGSSSDQTRLASLRHLRRTSAEDPAARPLISAAGAVPLLASALYSPSHPIQDHAAATLLNLSISDRRPLAVSATLPDALAHLLSRHATSSAASAVQSAAATLHSLLAVVPEFRHVISSKLDILRALVGIISHPNSPTRSVKDALKASFGVALHPPSRIMLIRLGAVSVLFAVIAKDKDGKRRVGLIEDATAVIAQVAACEESEEVFRKLSGVSILAMMLGSESGSCSLRTKENAVAALLNLVRCGSEKVFEEVRTKVGGLDGICYVQEHGSPKGKSKAVAFFKLLLDGGGSNSDENVQDLYPVDSESGSSCSA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2965 327 MobiDBLite consensus disorder prediction 305 327 - -
Aed1g2965 327 SUPERFAMILY ARM repeat 7 312 IPR016024 -
Aed1g2965 327 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 48 76 IPR000225 GO:0005515
Aed1g2965 327 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 312 - -
Aed1g2965 327 PANTHER U BOX DOMAIN-CONTAINING 2 312 - -
Aed1g2965 327 SMART arm_5 37 77 IPR000225 GO:0005515
Aed1g2965 327 SMART arm_5 213 257 IPR000225 GO:0005515
Aed1g2965 327 SMART arm_5 167 212 IPR000225 GO:0005515
Aed1g2965 327 Pfam Armadillo/beta-catenin-like repeat 40 76 IPR000225 GO:0005515
Aed1g2965 327 Gene3D - 5 302 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2965 Aed-Chr1 25172353 25173336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2965 8 299 U-box Gene Family AT2G23140 29.831 6.51e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2965 - - gmx:100803111 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2965 1 25172353 25173336 Aed1g2965 1 25172353 25173336 ECH