Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2942 ATGGCTGGACCACCAATGTCAATATTTTCAATTCCATCCTCAAAAGCAACGCCTCCAGCTGATGTGACTTTATCTTTGTTGGAACTTCTAATTCTGTTCTGCTTGTGCCTTGTACCACCAGCAAATCATTCGGAATTTTATGGAAATCAACAAAAGAATGATAGTACTAATGATGAAGAGAAAGTTGTTGCACCTGTACTCAAAGTTGTATCTGGATTATTTAACTGGGATGGTCTTATAGACAATATTCGAGCTAGTGATGAGGAATTATTGTCCGGACTGCAGTCCCTTTCAGCACTAGAGATTAATGGGTATTGGAGATTAGCAGACAAGAGTTACATGAACATGATTCTGGGAATGATTTTGAAAAATGCAGTGTTAAATAACAAAGCAAATGAGGAATTATTGCCACTTAATGCGTTGAATGAAGATGAAGTTGAGATTCCAGACGGAACGCATCCAAGTTTTGATCTTGTAAAAGAAGAGGTATCGACAGAGAGAATAGGAGTTGAGACATGGGTTCACGCCTTCAGTGTTGCTTCTTTGCCTTAA 552 0.3859 MAGPPMSIFSIPSSKATPPADVTLSLLELLILFCLCLVPPANHSEFYGNQQKNDSTNDEEKVVAPVLKVVSGLFNWDGLIDNIRASDEELLSGLQSLSALEINGYWRLADKSYMNMILGMILKNAVLNNKANEELLPLNALNEDEVEIPDGTHPSFDLVKEEVSTERIGVETWVHAFSVASLP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2942 183 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 59 145 IPR019128 GO:0007064|GO:0031390
Aed1g2942 183 Pfam Sister chromatid cohesion protein Dcc1 50 132 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2942 Aed-Chr1 24872068 24874712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2942 72 183 C3H Transcription Factor Family AT2G44580 32.544 7.47e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2942 K11271 - gmx:100807595 143.665