Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2917 ATGGGTGCAGCTGAAGATCTTGTGAATAGCACACCAGGTGCAGCAGAAAGCCAGGTAAACCACACACCAGGTGCAGCAGAAAGTCAGGTAAACCACACACCAGGTACAGCAGAAAGTCAGGTAAACCACACCCCAGGTCCTTCAGAAAATCCTATAGAGAACACCAGTGCTTCAGAAAATCCTATAGAGAACACCAGTGCTTCAGAAAATCCTATTGAGAACACCAGTACTTCAGAAAATCCTATAGAGAACACCAGTACTTCAGAAAATCCTCTAGAGGACAAAGCACCAGGTGCAGAAAATCCTGTAAGCGATCAACCAGGTGGTGCAGAAATTCCTAAAGCTGGAGGTGCAGAAAATCCTGCAAGTGACCAAAAAAATGTTCAACAAATTCCTGAAAGTGAACAAGCAAATAGTGAAGAAAATCTGGTTAAATACCAAGTTGATGGGGCCGAAAATCTGGTTAAACAAGAAGTTGGTGGGGCAGAAAATCCTTTAAATGACCCAATAGATGTTGCACAAAATCCTGCAAGTGAACAAGCAGGTAGTGTGGACAATCTGTTAAATGACCTAGCAGGTGGTGCAGGAGATCCTCCATATGACCAAGCAGCAGGTGGTGCAGAAAATTCTGCAGAAAAGCAGGCAGCTGCATCAGAAAGTGTTATGAATGACAAAGCTAGCAGTATAGAAAATCCTGTGAACAACAATGCAGATGGTGTAGATAATTTGTCAAGCAACCAAACAGATGCTACAGAGAAACTTGTAATTGATGAACAGAGTCCTGCTGAGAGTTTTGTAGATGATGAAACAGATGCTGCTGAAATGCCTGAAAACAGCAAAGAAAATGTTGAGACCCCTGTAAGCTGCAAAGCATATCGGCTTCCAGAAGAAGCAAAGGAGATACTGAAATCGTTGGCAAGTGAGTGGGAGAATGTACTTGATGCAAATACATTGCAGGTGATTCCTCTCAAAGGGGCAATGACGAATGAGGTATACCAGATAAAGTGGCCAACTACGGCGGGTGAAATGTCACGAAAGGTTCTTGTTAGAATATATGGTGAGGGTGTGGACGTGTTCTTTGATAGGGATAATGAGATCCAAACATTTGAATTCATGTCAAAGAATGGGCAAGGTCCTCGTCTACTAGGACGATTTACAAATGGCCGTGTTGAAGAGTTTATCCATGCACGGACGTTATCAGCATCGGATCTACGTGATCCATCTACTTCTGCTCTTATAGCAGCCAAAATGATGGAGTTCCATGATCTAGATATGCCTGGTGAAAAGAAAGTCCACCTTTGGGATAGATTGCGAAATTGGCTTAGTGAAGCCAAACATGTATCGTCCCCTAAAGAAGTTGAAGCTTTCTATTTGGACACAATTGACAAAGAAATATCTATTTTGGAAAAGGAACTATCAGGCTCACACCAGCGGATAGGATTTTGCCACAATGATCTACAATATGGTAACATAATGCTTGATGAAGATACCAATTCTCTGACCATCATAGACTACGAATATGCTAGTTATAATCCTGTAGCATTTGATATTGCAAATCACTTTTGTGAGATGGCTGCTAACTATCATTCAGAAGAACCTCATATCCTTGACTACAATAAATATCCTGACTTTGAGGAGCGTCAAAGATTTGTGCAGGCATATTTGAGTATCTCTGCAGATGACCAGTCTAGTGCCAATGAAGTGGAGCAGCTACTTCAAGAAATTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGTGTTTGGGGAATAATTTCGGCACAAGTAAACACAATCGAGTTTGACTACAAGGAGTATGCCAAACAGAGGTTTCAAGAGTACTGGGCAAGAAAACCTTATCTTTTAATAAACTCTGAAGCACCTTCTCCTTATAATGTGCCTGAGGGTACAGGAGATCTAGCTTCAGCAGCGCCACCCAAATCGAAGAACTCTGGAATCTTTAGGAAGATGAAGAGAGTTTTGGGTCTCGGTTTGTTCAGGTCTAAGAACTAG 2013 0.4183 MGAAEDLVNSTPGAAESQVNHTPGAAESQVNHTPGTAESQVNHTPGPSENPIENTSASENPIENTSASENPIENTSTSENPIENTSTSENPLEDKAPGAENPVSDQPGGAEIPKAGGAENPASDQKNVQQIPESEQANSEENLVKYQVDGAENLVKQEVGGAENPLNDPIDVAQNPASEQAGSVDNLLNDLAGGAGDPPYDQAAGGAENSAEKQAAASESVMNDKASSIENPVNNNADGVDNLSSNQTDATEKLVIDEQSPAESFVDDETDAAEMPENSKENVETPVSCKAYRLPEEAKEILKSLASEWENVLDANTLQVIPLKGAMTNEVYQIKWPTTAGEMSRKVLVRIYGEGVDVFFDRDNEIQTFEFMSKNGQGPRLLGRFTNGRVEEFIHARTLSASDLRDPSTSALIAAKMMEFHDLDMPGEKKVHLWDRLRNWLSEAKHVSSPKEVEAFYLDTIDKEISILEKELSGSHQRIGFCHNDLQYGNIMLDEDTNSLTIIDYEYASYNPVAFDIANHFCEMAANYHSEEPHILDYNKYPDFEERQRFVQAYLSISADDQSSANEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIEFDYKEYAKQRFQEYWARKPYLLINSEAPSPYNVPEGTGDLASAAPPKSKNSGIFRKMKRVLGLGLFRSKN 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2917 670 PANTHER CHOLINE/ETHANOALAMINE KINASE 281 630 - -
Aed1g2917 670 Pfam Choline/ethanolamine kinase 345 545 - -
Aed1g2917 670 Pfam Choline kinase N terminus 244 316 IPR007521 GO:0016773
Aed1g2917 670 Gene3D - 353 615 - -
Aed1g2917 670 PANTHER CHOLINE KINASE 2-RELATED 281 630 - -
Aed1g2917 670 MobiDBLite consensus disorder prediction 1 141 - -
Aed1g2917 670 MobiDBLite consensus disorder prediction 171 185 - -
Aed1g2917 670 SUPERFAMILY Protein kinase-like (PK-like) 289 622 IPR011009 -
Aed1g2917 670 MobiDBLite consensus disorder prediction 157 286 - -
Aed1g2917 670 MobiDBLite consensus disorder prediction 122 141 - -
Aed1g2917 670 CDD ETNK_euk 318 617 - -
Aed1g2917 670 MobiDBLite consensus disorder prediction 11 92 - -
Aed1g2917 670 Gene3D Phosphorylase Kinase; domain 1 305 393 - -
Aed1g2917 670 MobiDBLite consensus disorder prediction 213 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2917 Aed-Chr1 24593310 24600330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2917 284 626 Acyl Lipid Metabolism Gene Families AT1G74320 65.598 1.25e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2917 K14156 - gmx:547867 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2917 1 24593310 24600330 Aed1g2917 1 24593310 24600330 ECH
Aed1g2917 1 24593310 24600330 Aed4g1458 4 19115294 19128429 PCT