Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2915 ATGTCCACGGCGGCTCCGCCTCCCTCCGCCGCCGAATCCACCGCCACCGGCGTCGGCCTCGGCTACGGCATTGCCATCGCCGTCAGCATCCTCGTCCTCATCTCCACCATCATGCTCGCCTCCTACGCCTGCGTCCGCATCAAGTCCAACAGCACTCATCATCGCCGCAACAGCGGCAGACAAAACAGTTTCCGCGACGACGATAACCACAACGACGATAACAATAACGATAGGCCCGCGGTGGTGGTCCTGGGCCTGGAGAAGCCCGCCATCGAGGCCTGCTACGGGCCCAAGATCGTGATCGGAGAGAGCAAGCGCCTGCCCAGGCCCAACGACCACGGCCTGTGCGCGATTTGCCTAAGCGAATACCTTCCGAAAGAGACCATACGGTGCGTTCCGGAGTGCCGCCACTGCTTCCACGCGGAGTGCGTCGACGAGTGGCTAAAGTCGAACGCCACGTGTCCTCTCTGCCGGAACTCCCCCGCGCCGTCGCCGCTTCCCACTCCGGCCGCCACGCCGTTGTCGGAGCTCGTTCCGCTGGCTTTCCACGCCAGGTGA 558 0.6434 MSTAAPPPSAAESTATGVGLGYGIAIAVSILVLISTIMLASYACVRIKSNSTHHRRNSGRQNSFRDDDNHNDDNNNDRPAVVVLGLEKPAIEACYGPKIVIGESKRLPRPNDHGLCAICLSEYLPKETIRCVPECRHCFHAECVDEWLKSNATCPLCRNSPAPSPLPTPAATPLSELVPLAFHAR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2915 185 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 20 164 - -
Aed1g2915 185 MobiDBLite consensus disorder prediction 53 78 - -
Aed1g2915 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 163 IPR013083 -
Aed1g2915 185 MobiDBLite consensus disorder prediction 59 75 - -
Aed1g2915 185 CDD RING-H2_EL5_like 116 158 - -
Aed1g2915 185 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Aed1g2915 185 PANTHER RING-H2 FINGER PROTEIN ATL69-RELATED 20 164 - -
Aed1g2915 185 Pfam Ring finger domain 116 158 IPR001841 -
Aed1g2915 185 SUPERFAMILY RING/U-box 115 162 - -
Aed1g2915 185 SMART ring_2 116 157 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2915 Aed-Chr1 24574170 24574727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2915 1 185 C3H Transcription Factor Family AT5G07040 56.915 8.82e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2915 - - gmx:100803286 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2915 1 24574170 24574727 Aed1g2915 1 24574170 24574727 ECH