Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g2915 | ATGTCCACGGCGGCTCCGCCTCCCTCCGCCGCCGAATCCACCGCCACCGGCGTCGGCCTCGGCTACGGCATTGCCATCGCCGTCAGCATCCTCGTCCTCATCTCCACCATCATGCTCGCCTCCTACGCCTGCGTCCGCATCAAGTCCAACAGCACTCATCATCGCCGCAACAGCGGCAGACAAAACAGTTTCCGCGACGACGATAACCACAACGACGATAACAATAACGATAGGCCCGCGGTGGTGGTCCTGGGCCTGGAGAAGCCCGCCATCGAGGCCTGCTACGGGCCCAAGATCGTGATCGGAGAGAGCAAGCGCCTGCCCAGGCCCAACGACCACGGCCTGTGCGCGATTTGCCTAAGCGAATACCTTCCGAAAGAGACCATACGGTGCGTTCCGGAGTGCCGCCACTGCTTCCACGCGGAGTGCGTCGACGAGTGGCTAAAGTCGAACGCCACGTGTCCTCTCTGCCGGAACTCCCCCGCGCCGTCGCCGCTTCCCACTCCGGCCGCCACGCCGTTGTCGGAGCTCGTTCCGCTGGCTTTCCACGCCAGGTGA | 558 | 0.6434 | MSTAAPPPSAAESTATGVGLGYGIAIAVSILVLISTIMLASYACVRIKSNSTHHRRNSGRQNSFRDDDNHNDDNNNDRPAVVVLGLEKPAIEACYGPKIVIGESKRLPRPNDHGLCAICLSEYLPKETIRCVPECRHCFHAECVDEWLKSNATCPLCRNSPAPSPLPTPAATPLSELVPLAFHAR | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g2915 | 185 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 20 | 164 | - | - | |
Aed1g2915 | 185 | MobiDBLite | consensus disorder prediction | 53 | 78 | - | - | |
Aed1g2915 | 185 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 163 | IPR013083 | - | |
Aed1g2915 | 185 | MobiDBLite | consensus disorder prediction | 59 | 75 | - | - | |
Aed1g2915 | 185 | CDD | RING-H2_EL5_like | 116 | 158 | - | - | |
Aed1g2915 | 185 | ProSiteProfiles | Zinc finger RING-type profile. | 116 | 158 | IPR001841 | - | |
Aed1g2915 | 185 | PANTHER | RING-H2 FINGER PROTEIN ATL69-RELATED | 20 | 164 | - | - | |
Aed1g2915 | 185 | Pfam | Ring finger domain | 116 | 158 | IPR001841 | - | |
Aed1g2915 | 185 | SUPERFAMILY | RING/U-box | 115 | 162 | - | - | |
Aed1g2915 | 185 | SMART | ring_2 | 116 | 157 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g2915 | Aed-Chr1 | 24574170 | 24574727 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g2915 | 1 | 185 | C3H Transcription Factor Family | AT5G07040 | 56.915 | 8.82e-60 | 182 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g2915 | - | - | gmx:100803286 | 273.092 |