Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2910 ATGCATGAAATGCTACAAGAATTGGGAAAGAAAATAGTTCGTGACCATTCTCCTGAAAAGCCAGGATCATGGAGTAGAATATGGCTATACGAGGACTTCTTTCGCACCTCAGAAATGGGGACAGAGAATGTCAAAGCCATAGTTCTAGATCAAAAGGAAGATATCTCCGAATGTATTGTTGATGGATTGTCAAAAATGAAGGAGCTTACATTACTCATATTATATCACAAACAATTCTCAGGAAGCCTCGAGTTTCTTAGTAACAGGCTGCGATATCTTTTGTGGCAGGATTTTCCTTTTGCTTCTCTTCCGCCATATTTTACCTGCTCTGATCTTGTGGAATTGAATATGCCTAATAGTAGCATGACACGTGTATGGGAAGGCCACAAGTTTTTCCTCACCTTCCATTCCCAAGTGTTATTCCATCGGGAGGAAGGTATTTTAAAATGGTGTCTAGATCTCGTGATCATAGATCAGGATTATATCTTTTTGATTGTCCCAAACTACAAGCTTTTTATAAGCTTTCCACATGCACAACCATACTACTTCTATGGCTAA 558 0.3907 MHEMLQELGKKIVRDHSPEKPGSWSRIWLYEDFFRTSEMGTENVKAIVLDQKEDISECIVDGLSKMKELTLLILYHKQFSGSLEFLSNRLRYLLWQDFPFASLPPYFTCSDLVELNMPNSSMTRVWEGHKFFLTFHSQVLFHREEGILKWCLDLVIIDQDYIFLIVPNYKLFISFPHAQPYYFYG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2910 185 Pfam Leucine Rich Repeat 111 128 IPR011713 -
Aed1g2910 185 SUPERFAMILY L domain-like 47 126 - -
Aed1g2910 185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 130 IPR044974 GO:0006952
Aed1g2910 185 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2910 Aed-Chr1 24495760 24501054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2910 1 139 WRKY Transcription Factor Family AT4G12020 34.437 1.72e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2910 - - vra:106778604 201.06