Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2907 ATGTTTATTCAAAAGAATCCAAATAAGTTCTTCATGTCCATCAATGAAGGAGAGAAAAGGACTTTTGACTTTTTATATATTCTATATAACGGTTGCATTACTAGAGGTGTTGCTTGTGTTGTTGTAGAAATAGTTTTATACCCCATTGATACCATCAAAACTCGACTACAAGTTGCTCATGATGGAGGAAAAATTGTTATGAAGGTATGTATGCTTGATAGACTATTCTTCCTCTCTTGCAAAGCTTCTGCAGTTTTTATTGGTGTGTATGAACCCACAAAGCAGCAATTGCTAAAGTCATTGCCTAAGAATCTCAATGTCATGACTCATTTTATAATTGAGATAAATCCTAGGATAGACAAACCAGGAGTGGCAGCAAGGTACATTTCAACCTTTGCAAACAAAAATGGGGAAGACATTGCAAATTGGATGCAAGCTGCAAGTGCTATTGGAAGCATTACTTCTTCTATTGTTGTTAAGCAAAGGATTCAGATTGGATCAGCCCCGGATGCTGTTCGTCTTATTGTCACTAATGAGGGTTTTAAAAGTCTTTTTGCGGCAAAAAGAGATCCTAATGATCCAAAGAATGCTATGCTTGGGGCAGTGGCTAGTGCCGTAGCTAGAGCAATTACAACTCCTCTTGATGTAGTAAAGACCAGATTGATGGTTCAAGGATCACAAAATCATTACAAAGGCATTTCTGATTGTGTGAGAACAATAGTTAAAGAAGAAGGAAGTCATGCTCTTTTTAAGAGTTTTTTTGTCACAAATAGAAAATGTGTGGAAAACAAGTCGAACGTTCATGTGCATGGTTCATCCTCCTTCCTCTACAGCATCTACTTCTTCCGTTCACTAACCCTTACCAAACTCCGCTGCAACCATTTCTCCAATCACTTGGGAATGCCATCTCATTTCTCGTCGAGCTCTCTCCACTAA 936 0.3825 MFIQKNPNKFFMSINEGEKRTFDFLYILYNGCITRGVACVVVEIVLYPIDTIKTRLQVAHDGGKIVMKVCMLDRLFFLSCKASAVFIGVYEPTKQQLLKSLPKNLNVMTHFIIEINPRIDKPGVAARYISTFANKNGEDIANWMQAASAIGSITSSIVVKQRIQIGSAPDAVRLIVTNEGFKSLFAAKRDPNDPKNAMLGAVASAVARAITTPLDVVKTRLMVQGSQNHYKGISDCVRTIVKEEGSHALFKSFFVTNRKCVENKSNVHVHGSSSFLYSIYFFRSLTLTKLRCNHFSNHLGMPSHFSSSSLH 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2907 311 Gene3D Mitochondrial carrier domain 164 270 IPR023395 -
Aed1g2907 311 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 186 252 - -
Aed1g2907 311 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 4 186 - -
Aed1g2907 311 Pfam Mitochondrial carrier protein 195 256 IPR018108 -
Aed1g2907 311 SUPERFAMILY Mitochondrial carrier 33 256 IPR023395 -
Aed1g2907 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 191 277 IPR018108 -
Aed1g2907 311 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 186 252 - -
Aed1g2907 311 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 4 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2907 Aed-Chr1 24472005 24476753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2907 165 256 Chloroplast and Mitochondria Gene Families AT1G07030 33.696 6.82e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2907 K15111 - gmx:100800051 271.552