Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2901 ATGGAATCACCTCTGCAGCCAGGTTCAAGAGGGGCAGAAGCACTTAAAAATATATCTCCTGGATCATCAGTTTCTGTTGCATATCACCCGTTATTTGGACCTTATGATGACCTCCTCTTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGAATGAAAGGGTGGTCTTGAGAGGACAGCCTGACGAATTTGCCGTTCTTTGTACTCAATCTAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCTGTTCTGCTTGTACCACCAGAAAATCATTCTGAATTGTATGAAAATCCACAACAAAAGAATGATAGTAATAATGATGAAGGGCAAATTGTTGTACCTGTGGTCAAAGTTGTATCTGGTAACATGGAGCTTATTGAGGCAGCCCCCAGACTAGATAAGCTTAAATCACTTCTGTCAGAGAAGCCTTACAAATTGGAGGAGGATGACGACATGGGAAATTTAGAAGAGAATCCAGAATCTAGAATAGGACTATATAACTGGAATGATCTTGTAGACAATATTCAAGCTAGTGATGGGGAATTATTGTCCGGACTGCATGCTATTTCAGCGCTGGAGATTAATGGCTATTGGAGATTACTCGACGGGAGTTACATGGACATGATTCTGGGAATGATTTTGAAAAATGCAGTGTTGAATGACTGGTCACTTGATGCTTTAAATGAAGATGAAGTTGTGAGCACACTGGTATCAGATGGATTTCTTGGGGTTCTGGCACGGCATTGTTTGCATGTATATGGTAACAAAGTAAAAGAGTGCATGCCTATCTGGAAGTTGGATGAGAAGCAAGTATGCATTCATTTTGCTAGAGAAATCCTGAAAGGGGGTAAGAGGAAGTTAGAGAGTTTCATGGATGAATGGAGGCAGAAGATTCCAGATGGAATGCATCCCACTTTTGATCTTGTGGAGGGAGAGCTATTAACAGAGAGAGTTGGAGTTGAGACATGGGTTCGCGCCTTCAGTGTCGCTTCTTTGCCTTCCACTCCAGCTGAGCGTTTCTCCATTCTTTTCAGAGAGAGACCAAAATGGCAATGGAAAGATTTGCAGCCCTATATCAGAGATCTGAAGGTACCAGGTCTTTCTTCAGAAAGTTTGCTACTCAAATACACTCGAAGGACACAACCATCACCTGATACAGAACCAGTTTTCAGTGCAAGATAG 1191 0.4165 MESPLQPGSRGAEALKNISPGSSVSVAYHPLFGPYDDLLFLELDEKLLPDVLNERVVLRGQPDEFAVLCTQSKTYAMKFVGTSNSVLLVPPENHSELYENPQQKNDSNNDEGQIVVPVVKVVSGNMELIEAAPRLDKLKSLLSEKPYKLEEDDDMGNLEENPESRIGLYNWNDLVDNIQASDGELLSGLHAISALEINGYWRLLDGSYMDMILGMILKNAVLNDWSLDALNEDEVVSTLVSDGFLGVLARHCLHVYGNKVKECMPIWKLDEKQVCIHFAREILKGGKRKLESFMDEWRQKIPDGMHPTFDLVEGELLTERVGVETWVRAFSVASLPSTPAERFSILFRERPKWQWKDLQPYIRDLKVPGLSSESLLLKYTRRTQPSPDTEPVFSAR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2901 396 Pfam Sister chromatid cohesion protein Dcc1 40 362 IPR019128 GO:0007064|GO:0031390
Aed1g2901 396 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 17 396 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2901 Aed-Chr1 24409756 24413609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2901 11 396 C3H Transcription Factor Family AT2G44580 55.499 4.53e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2901 K11271 - gmx:100817511 697.197