Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2893 ATGGCTCTGAACGACATCATCTCGTGTGCTGCAGCTGCTGCAGCTAATTACTCTTCTTTTTCTTCTTCTTTTTCTCTTCCAATTCCAACCTCTCTTGTTCGCTTTCTCCACTCCCGAGGTGGATCCTCCTCTTGCGTCCACATTCCCTCTGAGCTTCTCAGGGACTTCGCCACGAGAGAGTTCAATGCGTTTCTTTGGCTATTTCTCGTTGCTGTCACCACCCTTTTGCTCACAAGACTCTTCAGCATCTTCTGGCTCTGGCACAGGGCCAGAACCATTCCTGGGCCTCCCTCAAACTCTTTCTTTGGCCACTGCAAGCTCTTTTCCCGCCAAAATCTCACCTTCAATGATGTGTTATCAGAATCCCATCAAAAGTATGGAACTATTGTTAAGCTGTGGTTAGGTCCTACTCAGCTGTTGGTGTCTGTTAGGGATCCAGCATTAATTCAAGAGATGCTTATAAAGGCAGAGGATAAGTTGCCTTTTATTGGAAAAGTGTTGCATCTGGCCTTTGGGGAATCAAGCCTCTTTGCCCATTCCTTTGAAAAGGTGAAAAAGCGAAGGGAACTATTGGCAAATGAATTACATGAAAGGTTGTTGAAGAACGATGATGTGATTCCCATGAAGGTTGCAGACTTCATAACAGATAAAATAGAAAACATCAGAACCAAACGAGGCATCGATTCTGGGCTGCTTTCTCAGCATATGGCTTTCACAATGATGGGAGCCACATTCTTTGGAGATGGCTTCTTGGCCTCGCCAAAGGCTGCAATATACGAGGAAATGTTTATGATGATTGCCAAAGATGCTTGCTTTTGGGCCTCGTATAGTGTTACTCCTTTCTGGAGAAGCGAATTTTGGAGATATCAAGGCTTATGCACCAAGTTGAAATGCTTAACTCAAGACATCCTTCAACATTTCAGAAAAGGCTGCAAACTATTTGGCCATACTGACCAAGATGGTGCACAGTGCTGTTCTGATGACAAGTTCCAAGATTACTATTTCTTTCGTGATCTTAAGGATCATCGAGATGGTAAACAAGAACCTTGTGGGAACATAATGCGTTTGATATTTCATGGATGCCAAACTACATCTGCTTTAATCACCAATATATTGACTATGCTTGTCATGCATCTGGAAATACAGGATAAGGTTTATTTGGAGATTAGCATGGTAGGAAGAAACCCATCAAAATATGTGCATGAAGATGTTTATAGGATGCCTTTGTTATGGGCTACAATATTTGAATCTGCACGCCTTCTTCCCACTAGTCCCATGCTGCAGAGGTGTTCTTTGAAACATGATGTGTGCTTTGCAACTGGTGTAACCATACCTGCTGGAGCTGTGCTGGTTGTACCAGTTGAATTGGTACAGAAGGATGAATCCAGTTGGGGGAGTGATGCAAGTGATTTTAATCCTTACCGATTTTTGTCAACTGGTTCTGCTGAAGACCTTTCATTTGTGCTCAATGATCCAAATGAAAATGCAGCATTTCTTCCTTTTGGATCTGGTACACGTGCTTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAAAAAATATGAGATACGGCTTGACTCGGTATCAGATGAAGACACAACCACAACCTTGAAGAACAATAATCTTCTTATTCAGCACCATCCCAATTCACAGATATTATTCGTGAAAAGGGATCAGTGA 1704 0.4249 MALNDIISCAAAAAANYSSFSSSFSLPIPTSLVRFLHSRGGSSSCVHIPSELLRDFATREFNAFLWLFLVAVTTLLLTRLFSIFWLWHRARTIPGPPSNSFFGHCKLFSRQNLTFNDVLSESHQKYGTIVKLWLGPTQLLVSVRDPALIQEMLIKAEDKLPFIGKVLHLAFGESSLFAHSFEKVKKRRELLANELHERLLKNDDVIPMKVADFITDKIENIRTKRGIDSGLLSQHMAFTMMGATFFGDGFLASPKAAIYEEMFMMIAKDACFWASYSVTPFWRSEFWRYQGLCTKLKCLTQDILQHFRKGCKLFGHTDQDGAQCCSDDKFQDYYFFRDLKDHRDGKQEPCGNIMRLIFHGCQTTSALITNILTMLVMHLEIQDKVYLEISMVGRNPSKYVHEDVYRMPLLWATIFESARLLPTSPMLQRCSLKHDVCFATGVTIPAGAVLVVPVELVQKDESSWGSDASDFNPYRFLSTGSAEDLSFVLNDPNENAAFLPFGSGTRACIGQKFIIQLVASVLASLLKKYEIRLDSVSDEDTTTTLKNNNLLIQHHPNSQILFVKRDQ 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2893 567 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PRINTS E-class P450 group I signature 498 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PRINTS E-class P450 group I signature 508 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PRINTS E-class P450 group I signature 123 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PRINTS P450 superfamily signature 508 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PRINTS P450 superfamily signature 359 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PRINTS P450 superfamily signature 499 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PANTHER CYTOCHROME P450 4C3-RELATED 65 542 - -
Aed1g2893 567 Gene3D Cytochrome P450 87 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 SUPERFAMILY Cytochrome P450 93 565 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 501 510 IPR017972 GO:0005506|GO:0016705
Aed1g2893 567 Pfam Cytochrome P450 94 555 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2893 567 PANTHER CYTOCHROME P450 FAMILY 4 65 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2893 Aed-Chr1 24320539 24326844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2893 67 533 Cytochrome P450 AT2G26710 25.152 1.63e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2893 - - gmx:100809563 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2893 1 24320539 24326844 Aed1g2893 1 24320539 24326844 ECH