Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2828 ATGTGGTATCATGGTGGTGGTGATAATAATGGAAAAAATTCAATGTACAATCTCACACTTGATGAAGTTCAGAATCAATTAGGCGACTTAGGAAAACAGCTAGGTAGCATGAACCTTGATGAGCTTCTAAAAAATGTGTGGACTGTTGAGGCAAACCAATTCACTAGTGTGGACATTGAGGTTAAGGGTGCAACTCAAACTACTCAAGATGTGCTGCAACAGGCTTGTCTGGCGTTAACTAGAGCTCTAAACAGTAAAACTGTTGATGAGGTTTGGAGGGATATACAGCAAAGCAGAATTAACAGCGACAAGACGTCACATGAGAAACAGTCTACATTGGGAGAAATGACATTGGAGGATTTCTTAGTAAAAGCCGGGGTTTTTGTCGAAACATCTTCTGATATGATGAATACTGGTGCTATAATTGGCTTTGATTCAAGTGTAGAAACAGCACAGTTTCCTCAGCATTGTTCTTGGATACACTATACTCAAGAATATCAACATACACAACAAGGCTCAATGGATATTTATATGCCTGCATCAGATGTTCCATATGCATATGCAAATGGTCAGGTGGCATTATCATCACCTATTATGGGCACCTCGTCAGATACTAGAGGACTTGGAGAGAAGACGCTTGAGAGGAGGATGAAGAGAATGATCAAAAATCGGGAATCTGCTGCCCGTTCTAGAGCAAGGAAACAAGCTTACACAATTGAATTGGAGCATAAAGTCTCACTCTTGGAAGAGGAAATTGAAAAGCTAAGGAGGGAGCAGGAGGAAACCAGAAAGAGTGCAGATGCTCATACTGTCATGGAGCTGGATTGCGAATAA 834 0.4101 MWYHGGGDNNGKNSMYNLTLDEVQNQLGDLGKQLGSMNLDELLKNVWTVEANQFTSVDIEVKGATQTTQDVLQQACLALTRALNSKTVDEVWRDIQQSRINSDKTSHEKQSTLGEMTLEDFLVKAGVFVETSSDMMNTGAIIGFDSSVETAQFPQHCSWIHYTQEYQHTQQGSMDIYMPASDVPYAYANGQVALSSPIMGTSSDTRGLGEKTLERRMKRMIKNRESAARSRARKQAYTIELEHKVSLLEEEIEKLRREQEETRKSADAHTVMELDCE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2828 277 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 10 260 IPR043452 GO:0003700|GO:0045893
Aed1g2828 277 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 265 IPR004827 GO:0003700|GO:0006355
Aed1g2828 277 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 10 260 - -
Aed1g2828 277 Pfam bZIP transcription factor 215 265 IPR004827 GO:0003700|GO:0006355
Aed1g2828 277 SMART brlzneu 211 275 IPR004827 GO:0003700|GO:0006355
Aed1g2828 277 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 218 233 IPR004827 GO:0003700|GO:0006355
Aed1g2828 277 MobiDBLite consensus disorder prediction 257 277 - -
Aed1g2828 277 Gene3D - 213 267 - -
Aed1g2828 277 Coils Coil 238 265 - -
Aed1g2828 277 CDD bZIP_plant_BZIP46 215 268 - -
Aed1g2828 277 SUPERFAMILY Leucine zipper domain 215 265 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2828 Aed-Chr1 23463260 23465145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2828 10 260 bZIP Transcription Factor Family AT3G56850 49.254 1.08e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed1g2828 bZIP_1 6.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2828 K14432 - gmx:100784924 321.242