Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2827 ATGGAATCTCATGGTGGTGGTGATAATAATGGAAAACATCCACAACTCCAGCCTTTGGTGCGGCAAAATTCAATGTACAATCTCACGTTCGATGAATTCCAGAATCAACTAGGTGACTTTCCGCTAGGTAGCATGAACATTGATGAGCTTCTAAGAAATCTGTGGACCTTAGAGGCAAACCAGTTCACTAGTGTGGACATTGAAGGTATAACTCAAACTGATCAAGCTGCGCTGCAACGCCAGGTTAGCAGTGCTCTAAGCAGGACTGTTGATGAGGTTTGGAGGGACATACAACAGAGCGAAGATAACAACAACTCACAGGGGAGACCATCTAAATTGGGAGATATGACATTGGAGAATTTCTTAGTAAAAGCCGGGATCTTTCCTGAAATATATTTTAATAGGATGAATATTGATGATACAATCGGCGTTGACTCAAGTGTAGAGACACCACAGTTTCCTCCTCACAGTCCTTGGATACAGTATGCACAACCACGGTATGCACAACAAGGCTTAATGGATATTTATATGTCTTGCCAGAATATTGGACAACCATTACAGATGGGAGCTGGCGCTGGTGCTGCATCAGATGGTTCATATGCAGATGCTCAGGTGGCATTATCTTCACCTATTGTGGGAACCTTGCCGGATACTGGAGGACTTGGGAGAAAACGGGCTGCGTCAGCGGACATGGTAGAAAAGACTGTTGATAAGAAGCAAAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCTAGAGCAAGGAAACAAGCTTACACAATTGAATTGGAGCACAGAGTCTCGTTTCTGGAAGAGGAAAATGAAAAGCTAAGGAGACAACAGATTCCTAACATTATTGTAGCAATCTATGGCGCTAGAGAAAGTGATGTCAAGCGCGCCACCTCCGAAACCCAGATACCAGATTCGCCGAACATCATCGGCTCCATTCTGAAATATGTATGTGTAAGAAAGAACAAGCTTGTAGATATGAGAGCATCAATGGATGATGCTTTTTTTAGTTTGATGTGA 1032 0.4341 MESHGGGDNNGKHPQLQPLVRQNSMYNLTFDEFQNQLGDFPLGSMNIDELLRNLWTLEANQFTSVDIEGITQTDQAALQRQVSSALSRTVDEVWRDIQQSEDNNNSQGRPSKLGDMTLENFLVKAGIFPEIYFNRMNIDDTIGVDSSVETPQFPPHSPWIQYAQPRYAQQGLMDIYMSCQNIGQPLQMGAGAGAASDGSYADAQVALSSPIVGTLPDTGGLGRKRAASADMVEKTVDKKQKRMIKNRESAARSRARKQAYTIELEHRVSFLEEENEKLRRQQIPNIIVAIYGARESDVKRATSETQIPDSPNIIGSILKYVCVRKNKLVDMRASMDDAFFSLM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2827 343 Gene3D - 237 284 - -
Aed1g2827 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 281 IPR004827 GO:0003700|GO:0006355
Aed1g2827 343 Pfam Basic region leucine zipper 237 282 IPR004827 GO:0003700|GO:0006355
Aed1g2827 343 SMART brlzneu 234 300 IPR004827 GO:0003700|GO:0006355
Aed1g2827 343 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Aed1g2827 343 Coils Coil 261 281 - -
Aed1g2827 343 SUPERFAMILY Leucine zipper domain 238 281 IPR046347 GO:0003700|GO:0006355
Aed1g2827 343 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 8 303 IPR043452 GO:0003700|GO:0045893
Aed1g2827 343 PANTHER BZIP TRANSCRIPTION FACTOR 8 303 - -
Aed1g2827 343 CDD bZIP_plant_BZIP46 238 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2827 Aed-Chr1 23453387 23455515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2827 17 282 bZIP Transcription Factor Family AT3G56850 45.583 8.21e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed1g2827 bZIP_2 8.4e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2827 K14432 - gmx:100784924 360.918