Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2820 ATGGCCGAAGTGATCAACATGCCTCCCGAATCCCTCGACCAATCTCCCTCCGCCTCCGCCTCCGCTCCTCCTCCGCCTCCACCGTCCGCCTCTTCCGCCGCCGCAGCTGCCGACGATCTCCCTCCACCGCCTCTCCCTCCTCCGGCGCGGCGCAGAGACCGCAGGGATGACCGCGATTTCGACCGCCACCCGAACCGCAGCCGCGATTACTACGACCGCGACAGGGACTTCAAGCGCCGCCGCAGCCCCAGCCCTGGCTACCGCGACCGCCGCTACTCTCCCCCGCCGCCATCGCGCCGGTCGCCTCCGCCGTACAAGCGCTCCCGGAGAGGCAGCCCTCGCGGCGGGGGCTATGGACCCGATGATAGATTTGGCTATGATTATTCTGGAGGCTATGAACGGGGAGTGGGTGGAAGGACTGGTTATGCAGATGACAAGTCTTATGGCAGGCTTGCACATCGATCTGCTGGGGGATATCATAATGGGATTTCTGATGTGGATATTAATCGTGGTTATGCAGATTTGCCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTTGAAGATGATGTACTGCCATCTGAAGCTGAGCGCAGGTATCAAGAGTACAAAACAGAGTATATTTCTACGCAAAAGCGAACTTATTTCAATGCTCATAAGGATGAGGAGTGGTTAAAAGATAAATATCACCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACTGCTTGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGATCTAAATCCTGGTTTGAACTCCACTTCATCCAGTAAATCAGGGCAAGCCAGTGAACCTAATTCAGAGGAAGAAACAGATGGTAAACGAAGAAGACATGGCAGGGGACCTAATAAAGATAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTGTCACTTCTGAACCTAGACGGATACAAGCAGATATTCAACAGGCTCAGGCTGTTGTTCGTAAGCTTGACAGAGAAAAGGGTATTGAAGATAATATTTTATGCACCAGTGACCATAATAAAAATGATGATAAGGCTCACAGTGGATCTGTGGGTCCCACAGTAATTATCCGTGGCTTAACATCTGTTAAGGGCTTAGAGGGTGTTGAGCTACTGGACACTCTTATTACATATCTTTGGCGGATACATGGTATTGATTATTATGGTTTGATTGAGACTAATGAGGCCAAGGGTTTTAGGCATGTGAGACCAGAAGGATCAGGGCATGAAGAAACAAGTAAATCAGGTTCTGACTGGGAGAAGAAACTTGATTTGTTTTGGCAGGGAAGGTTGAACGGTCAGGATCCATTGGAAGTGATGACTGCCAAGGAGAAGATAGATGCTGCAGCATCTGATGTGTTGGATCCTCATGTTAGAAAAATTAGGGATGAGAAATATGGGTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCGTCTGAATTTGTGCACAAACATTTGAAGCTAAAACACCCTGAGCTTGTGATAGACCTTACATCAAAATTGCGTGAGGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACGCCTGTCATGCAGCAACCGCAGAAGGATAGGCCACCTATAAAGCGAAGATTAGGGGGGTTGGAGGGCCGATTGAAGGACGACCGTGGTAACCGGCGAGACCAGGACAGGAATGACAGAATGAATGGAGATAGGCCTGACGGTTCCCCATCCCATGAAAGGCAGATGGGAAACCATGATGAAGCAATGTATGATGCATATGGAGGGCCCGGTGTATCTCCATTTACCTCAGATATGCACCCTCCCCCAGTTTTGATGCCTGTACCTGGTGCTGGACCTTTGGGACCCTTTGTCCCTGCTCCACCAGAAGTTGCAATGCAGATGTTCAGGGAGCAAGGAGGACCTTCGTCATTTGATGCCTCGGGAAGGAAGATGCGTTCTGGTCCTCATATGGGTGGACCTGCACCTATAATTGCTGTTCCTCCATCCTTTAGACCTGATCCTCGGCAGATGCGAAGTTATCAAGATCTGGATGCCCCAGAAGACGAAGTCACTGTAATAGACTATCGGAGCTTGTAG 2148 0.4907 MAEVINMPPESLDQSPSASASAPPPPPPSASSAAAAADDLPPPPLPPPARRRDRRDDRDFDRHPNRSRDYYDRDRDFKRRRSPSPGYRDRRYSPPPPSRRSPPPYKRSRRGSPRGGGYGPDDRFGYDYSGGYERGVGGRTGYADDKSYGRLAHRSAGGYHNGISDVDINRGYADLPSGGAQREGLMSYKQFIQELEDDVLPSEAERRYQEYKTEYISTQKRTYFNAHKDEEWLKDKYHPTNLLTVIERRNENARLLAKDFLLDLQSGTLDLNPGLNSTSSSKSGQASEPNSEEETDGKRRRHGRGPNKDNDFSAAPKAHPVTSEPRRIQADIQQAQAVVRKLDREKGIEDNILCTSDHNKNDDKAHSGSVGPTVIIRGLTSVKGLEGVELLDTLITYLWRIHGIDYYGLIETNEAKGFRHVRPEGSGHEETSKSGSDWEKKLDLFWQGRLNGQDPLEVMTAKEKIDAAASDVLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELVIDLTSKLREDLYFQNYMNDPDAPGGTPVMQQPQKDRPPIKRRLGGLEGRLKDDRGNRRDQDRNDRMNGDRPDGSPSHERQMGNHDEAMYDAYGGPGVSPFTSDMHPPPVLMPVPGAGPLGPFVPAPPEVAMQMFREQGGPSSFDASGRKMRSGPHMGGPAPIIAVPPSFRPDPRQMRSYQDLDAPEDEVTVIDYRSL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2820 715 Pfam SERRATE/Ars2, N-terminal domain 189 271 IPR021933 -
Aed1g2820 715 MobiDBLite consensus disorder prediction 1 126 - -
Aed1g2820 715 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 715 - -
Aed1g2820 715 MobiDBLite consensus disorder prediction 271 288 - -
Aed1g2820 715 Pfam Arsenite-resistance protein 2 429 617 IPR007042 -
Aed1g2820 715 MobiDBLite consensus disorder prediction 48 87 - -
Aed1g2820 715 MobiDBLite consensus disorder prediction 553 599 - -
Aed1g2820 715 ProSitePatterns Zinc finger C2H2 type domain signature. 491 514 IPR013087 -
Aed1g2820 715 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 715 IPR039727 GO:0006397
Aed1g2820 715 MobiDBLite consensus disorder prediction 533 599 - -
Aed1g2820 715 MobiDBLite consensus disorder prediction 656 696 - -
Aed1g2820 715 MobiDBLite consensus disorder prediction 289 308 - -
Aed1g2820 715 MobiDBLite consensus disorder prediction 271 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2820 Aed-Chr1 23370471 23379198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2820 87 715 C2H2 Transcription Factor Family AT2G27100 62.158 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2820 - - gmx:100817569 1158.28