Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2804 ATGAAAAGCAAAACCCTAGCGAGTCACCTTCTTCTGATTCCCCATATTAGTGTCCTTCGTTCTGCCGCTGCTGCAAAAAAAAAGCACTCAACTCGTGTTCACGTCATTCTCTCTGCGCGGGATTCACTCTACTCTGTTGCAAATGGTAATACTCAAACCCTCTCCTCTTTCTTCTTCTCTGGCGTACTCATCGACGACGACGTCGTTTTGCAGGCTTCCGAAAAGAAACTGTCGAATCCAATGCGAGAAATCAAAGTCCAGAAACTCGTCCTCAACATCTCCGTCGGCGAGAGCGGCGATCGTCTCACCAGAGCAGCCAAGGTGCTCGAACAACTCAGTGGCCAAACCCCTGTTTTCTCCAAAGCAAGGTACACTGTGCGTTCGTTTGGGATTAGGAGGAACGAGAAAATCGCGTGCTACGTTACGGTGAGAGGGGACAAGGCGATGCAGCTTCTGGAGAGTGGTTTGAAGGTGAAGGAGTACGAGTTGCTCAGGAGAAACTTCAGCGACACTGGCTGCTTCGGATTCGGCATTCAGGAGCACATTGATTTGGGAATCAAGTATGATCCTTCTACTGGTATTTACGGAATGGATTTCTTTGTTGTTCTGGAGCGCCCTGGCTACCGTGTGGGCCGCCGCCGTCGATGCAAGTCTCGTGTTGGAATCCAGCACCGTGTCACGAAGGAGGACTCCATGAAGTGGTTCCAAGTTAAATATGAAGGTGTCATCCTAAACAAGTCCCAAGCAATCGTTTAA 756 0.496 MKSKTLASHLLLIPHISVLRSAAAAKKKHSTRVHVILSARDSLYSVANGNTQTLSSFFFSGVLIDDDVVLQASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDSMKWFQVKYEGVILNKSQAIV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2804 251 Gene3D - 71 247 IPR022803 -
Aed1g2804 251 PANTHER 60S RIBOSOMAL PROTEIN L11-1 59 250 - -
Aed1g2804 251 SUPERFAMILY RL5-like 78 243 IPR022803 -
Aed1g2804 251 ProSitePatterns Ribosomal protein L5 signature. 109 125 IPR020929 GO:0003735|GO:0005840|GO:0006412
Aed1g2804 251 Pfam Ribosomal protein L5 79 132 IPR031310 -
Aed1g2804 251 Pfam ribosomal L5P family C-terminus 136 234 IPR031309 -
Aed1g2804 251 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 59 250 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2804 Aed-Chr1 23250624 23252752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2804 72 250 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 94.972 3.46e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2804 K02868 - gmx:100791687 339.347