Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2803 ATGGGTTCGCTCGAGGCCCCAACCAGCGCGGAAAACGGTTCCGTTCATACCGCCGGCAATGGAAAATCCACCTCCGTCAACGGCTCGGAGGCGCCGCCGGAGCCCGACTTGTCGAAGCGGCGGAGATCCTCGGTGCTCCCGCTGGAGGTTGGCACGCGCGTCATGTGCCGGTGGAGGGACAACAAGTACCACCCCGTCAAAGTCATCGAACGCCGCAAGGCTCCTAACTCCATCCCCAACGATTACGAGTATTACGTCCACTACACCGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGAACAGTTGGATCTTAATTCAGTGGAGGCTGTTGTTGATGAGAAAGTGGAGGAGAAGGGTGCAACTGGTTTGAAGATGACACGCCACCAAAAGAGGAAGATTGACGAGACACATGTAGAGGGACATGAGGAGCTTGATGCTGCTAGTTTGCGAGAACACGAGGAATTTACAAAAGTGAAAAATATTGCTACCATTGAGCTTGGAAGATATGAAATTGAGACATGGTACTTCTCCCCATTCCCACCAGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGTGATCTTAAGCATCCTCCTGGTGATGAGATATACAGAAGTGGTACACTGTCCATGTTTGAGGTTGATGGCAAAAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTGGCCAAGTTATTTCTTGACCACAAGACCCTCTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGTCACATGGTTGGCTATTTCTCCAAGGAAAAACACTCCGAGGAATCTTACAATTTGGCATGTATCCTCACCCTACCACCTTACCAAAGGAAAGGCTATGGAAAATTTCTAATTGCTTTTTCATATGAACTGTCCAAAAAGGAGGGCAAAGTTGGCACACCTGAAAGACCCCTTTCGGACCTTGGACTGCTAAGCTACAGAGGATATTGGACCAGGGTTCTCTTAGACATTCTGAAGAAGCATAAGGGAAACATTTCTATCAAGGCAAGTTCTTTTGAACTGAGTGATATGACAGCCATTAAAGCTGAAGACATATTAACCACTCTTCAGACCCTAGAATTGATTCAATACAGGAAAGGCCAGCATGTTATTTGTGCAGATCCAAAAGTGTTGGATCGCCATCTTAAAGCTGCTGGCAGAGGGGGCTTGGAGGTTGATGTTAGCAAACTCATCTGGACTCCATATAAAGAACAAAGTTGA 1317 0.4594 MGSLEAPTSAENGSVHTAGNGKSTSVNGSEAPPEPDLSKRRRSSVLPLEVGTRVMCRWRDNKYHPVKVIERRKAPNSIPNDYEYYVHYTEFNRRLDEWVKLEQLDLNSVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKASSFELSDMTAIKAEDILTTLQTLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2803 438 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 159 434 IPR016181 -
Aed1g2803 438 SMART chromo_7 62 121 IPR000953 -
Aed1g2803 438 Gene3D - 159 215 - -
Aed1g2803 438 SUPERFAMILY Chromo domain-like 42 159 IPR016197 -
Aed1g2803 438 Gene3D - 217 433 - -
Aed1g2803 438 Gene3D - 337 421 IPR036388 -
Aed1g2803 438 Pfam MYST family zinc finger domain 160 214 IPR040706 -
Aed1g2803 438 CDD NAT_SF 270 328 - -
Aed1g2803 438 Pfam RNA binding activity-knot of a chromodomain 48 106 IPR025995 -
Aed1g2803 438 MobiDBLite consensus disorder prediction 1 31 - -
Aed1g2803 438 PANTHER HISTONE ACETYLTRANSFERASE 24 438 - -
Aed1g2803 438 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 158 433 IPR002717 GO:0004402|GO:0006355|GO:0016573
Aed1g2803 438 Pfam MOZ/SAS family 219 400 IPR002717 GO:0004402|GO:0006355|GO:0016573
Aed1g2803 438 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 24 438 - -
Aed1g2803 438 MobiDBLite consensus disorder prediction 1 44 - -
Aed1g2803 438 CDD CBD_MOF_like 51 120 - -
Aed1g2803 438 Gene3D - 38 158 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2803 4 438 C2H2 Transcription Factor Family AT5G64610 84.703 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2803 K11308 - gmx:100819168 852.432