Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2785 ATGGATAAGATTCTGGAGGCAGATGTAAATAAGATGTCTCAGCATTCGTCATCGTCTTCGGTTGTTGCTCTGGCAATCAAGGGTAACAAGAAAAGCAAATATGTGGTACAGTGGGCACTGAATAAGTTTGTTCCTGAGGGAATGATAATCTTCAAGCTGATACATGTCCATGCTGGTATAAAAGGAGTTCCAACACCATTGATTGAATCAGATGATGTAGCAACTGCAGTAGCAGAGGAAGTAGCTAAGGGTGCTATAACCAAACTTGTTGTTGGAGCTTCATCTCGCAGCTTATTTAAAAGTAAACAGAAGGGTATGTCTACAAAAATATCAGTATGCGCTCCAAGATTTTGCACAATTTATGCTATTTCAAAGGGAAAATTGTCCATACGGCCGTCAGACATGCCAGTTGATGGAAGTATTATAGATGATGCTAGTGAAACGGAAACCAGTTTGTCCACCAGCAGTTCATCTAACTACACTTCCACCACTCAGACAGAATCTGCCTCAGTTTCATCATATGCTGGTTTACAGTCCTCTTCCCTAACAACACAACGATTTCAAGCTCTTTCAAGTATAAATAGTGCCCTTCTTAGCACCAATCCAAGCTTTCCTGACACTAACCATTCTAGAGGCCAATCTCTGGATATTGGGAGAGAAAATACTGCTACAAGTTCTGCCAGAAACTCGGACATTGATCATGCCTTAAGTCGAGTCTCTAGTTGCAAAAGCTTTATTTCAGATACTGAATCTTGGATGTATGATCAAATTTCTAGCAAGGATGTGCAACTAGAAACTACACTTCCCTCACCTAATAGGCAGGCAAAATTCAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTGGCTCAAAGTGAGAAGATTGAAGCATCCCGAAAGCTGAATGACCTAAGCAAAAGACGATCAGAAGAAACCATGAAAATGAAAGAGATTATTGCTAAGGAGGAGAAGGCAAAAGACCTAGCAATACTAGAAAGAGAGAAATATCAAGATGCATCAAGAGAAGCTTCATATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAGAGAAAAGAAACGGAGTTGAAAGCCATTCGTGCTGTGAAAGAGAAAGAAAAGCTGGAGGATGCTCTAAGTGGTTCCACGCTCCAGTATCGGAAGTTTACATGGGATGAAATAGTCTTAGCTACTTCATCCTTCTCCGAAGATCTGAAAATTGGAATGGGAGCATATGGAATAGTGTATAAGTGCAATTTGTATCACACAACTGTTGCTGTGAAAGTTCTCAAATCTAATGAAAATCGCAAAAGCAAGCAATTCCAGCGGGAGTTAGAGATTTTGAGCCGAATTCGCCATCCGAACTTGCTTCTTCTTCTTGGTGCATGTCCTGATCACGGATGCCTTGTGTATGAATACATGGAGAATGGTAACTTGGAGGACAGACTACTACGAAAAAACAACACTTCACCAATCCCATGGTTTGAGAGGTTTCGAATAGCTTGGGAAGTTGCATCAGCTCTCGCCTTTCTTCATAGCTCAAAGCCGGAACCTATCATCCATCGTGACTTGAAACCGGCAAACATCTTGCTCGATCGTAACCTTGTCAGCAAGATTGGTGACATCGGCCTTTCTACGGTGCTTCATTCAGATAATTTGTCTACCATGTACAAGGACACTGCACCTGTTGGGACACTCAGCTACATAGACCCTGAGTATCAAAGGACTGGGTTAATATCTCCAAAATCTGACGTTTATGCTTTTGGAATGGTGATTTTGCAGCTATTGACAGCAAAACCAGCAATAGCACTTGCTCATAAGGTTGAAACAGCTATTGATGAAGGGAATTTAACAGACATATTGGATCCAGAGGCAGGAGCTTGGCCAGTTCAAGAGACACGAGACTTGGCTTTGCTAGGACTGAGCTGTGCAGAACTTCGGCGTAGAGACCGGCCTGATTTACAAGATCAAGTTCTTCCAACACTAGAGAGATTGAAAGAAGCTGTGGACAGGGCCCAACATTCTGCTTCAATTGTTCCTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGACCCTTGTGTTGCAGCTGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGCTTGAAGAGAACGACAAATCACCAATGACAAACATGGCTTTACCTCATAAGCATTTAATTCCTAATTACACACTTCTCTCAGCTATTTTGGAGTGGAAGTCTGGAGAATCGTGA 2289 0.4176 MDKILEADVNKMSQHSSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHAGIKGVPTPLIESDDVATAVAEEVAKGAITKLVVGASSRSLFKSKQKGMSTKISVCAPRFCTIYAISKGKLSIRPSDMPVDGSIIDDASETETSLSTSSSSNYTSTTQTESASVSSYAGLQSSSLTTQRFQALSSINSALLSTNPSFPDTNHSRGQSLDIGRENTATSSARNSDIDHALSRVSSCKSFISDTESWMYDQISSKDVQLETTLPSPNRQAKFNLELEKLRIELRHAQGLHAVAQSEKIEASRKLNDLSKRRSEETMKMKEIIAKEEKAKDLAILEREKYQDASREASYLKECAEREAAERKETELKAIRAVKEKEKLEDALSGSTLQYRKFTWDEIVLATSSFSEDLKIGMGAYGIVYKCNLYHTTVAVKVLKSNENRKSKQFQRELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNNTSPIPWFERFRIAWEVASALAFLHSSKPEPIIHRDLKPANILLDRNLVSKIGDIGLSTVLHSDNLSTMYKDTAPVGTLSYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVETAIDEGNLTDILDPEAGAWPVQETRDLALLGLSCAELRRRDRPDLQDQVLPTLERLKEAVDRAQHSASIVPIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLEENDKSPMTNMALPHKHLIPNYTLLSAILEWKSGES 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2785 762 SMART Ubox_2 695 757 IPR003613 GO:0004842|GO:0016567
Aed1g2785 762 ProSiteProfiles Protein kinase domain profile. 408 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2785 762 Coils Coil 281 301 - -
Aed1g2785 762 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 67 758 - -
Aed1g2785 762 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 17 66 - -
Aed1g2785 762 SMART serkin_6 408 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2785 762 MobiDBLite consensus disorder prediction 201 229 - -
Aed1g2785 762 Gene3D Transferase(Phosphotransferase) domain 1 481 688 - -
Aed1g2785 762 Gene3D Phosphorylase Kinase; domain 1 387 480 - -
Aed1g2785 762 CDD RING-Ubox_WDSUB1_like 696 736 - -
Aed1g2785 762 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 691 762 IPR013083 -
Aed1g2785 762 PANTHER OS02G0152300 PROTEIN 67 758 - -
Aed1g2785 762 ProSitePatterns Protein kinases ATP-binding region signature. 414 435 IPR017441 GO:0005524
Aed1g2785 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Aed1g2785 762 PANTHER OS02G0152300 PROTEIN 17 66 - -
Aed1g2785 762 CDD STK_N 23 126 - -
Aed1g2785 762 Pfam U-box domain 693 759 IPR003613 GO:0004842|GO:0016567
Aed1g2785 762 SUPERFAMILY Protein kinase-like (PK-like) 390 662 IPR011009 -
Aed1g2785 762 Pfam Protein kinase domain 410 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2785 762 MobiDBLite consensus disorder prediction 146 165 - -
Aed1g2785 762 ProSiteProfiles U-box domain profile. 691 762 IPR003613 GO:0004842|GO:0016567
Aed1g2785 762 SUPERFAMILY RING/U-box 690 758 - -
Aed1g2785 762 Coils Coil 363 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2785 Aed-Chr1 23094575 23102188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2785 19 759 U-box Gene Family AT4G25160 50.366 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aed1g2785 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2785 - - gmx:100801699 1285.01