Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2769 ATGGCTGCCGAAGACCTAGTTCCTGTGCTGAGTTCCTTCAAAACCTTCTTGGGCAGGCCATGGAGGGAGTATTCAAGGACAGTGTTCATGCAAACCTACCTTGATTCATTGGTAGACCCTGCAGGGTGGTTGGAATGGAAAGACGATTTTGCCCTTGACACTTTGTATTATGGAGAGTACAGGAACCTTGGCCCTAGGGGTAATTCCGCCACAATTAGAGGTAGTAGAGTGAAATGGCGTGGCTACCGTGCCATAACAAGTGCAACCGAAGCATCCAAATTCACGTTGTTAATTTGGCGTACTGAAAAGAACCCTTGGCTATATGTTATGGCCAAGATTGAGTATTTAGTTTATTCTTTCCTTTTGCCAAGTAAGAAATAG 381 0.4488 MAAEDLVPVLSSFKTFLGRPWREYSRTVFMQTYLDSLVDPAGWLEWKDDFALDTLYYGEYRNLGPRGNSATIRGSRVKWRGYRAITSATEASKFTLLIWRTEKNPWLYVMAKIEYLVYSFLLPSKK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2769 126 PANTHER PECTINESTERASE 1 96 - -
Aed1g2769 126 PANTHER PECTINESTERASE 1 96 - -
Aed1g2769 126 Pfam Pectinesterase 2 96 IPR000070 GO:0030599|GO:0042545
Aed1g2769 126 SUPERFAMILY Pectin lyase-like 3 96 IPR011050 -
Aed1g2769 126 Gene3D - 1 112 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2769 Aed-Chr1 22942201 22943025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2769 1 107 Carbohydrate Esterase AT4G02320 54.206 2.59e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2769 K01051 - gmx:100776412 166.007