Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2768 ATGACATTCCGCAACACAGCAGGGCCAGAGAAGCACCAAGCAGTGGCAGTGCGTTGTGGTGCTGACCTCTCAGTGTTCTATCGCTGTGCATTTGAAGGGTACCAAGACACTCTCTATGTCCACTCCCAAAGACAGTTCTACAAGGAATGCAACATTTATGGCACTGTTGACTTCATCTTTGGCAACGCTGCTGTGGTCTTCCAATCCTGCAATATATACGCCAGAAGGCCAATGCAGAAGCAGAAAAACGCCATAACAGCACAAGGTAATAATTAA 276 0.471 MTFRNTAGPEKHQAVAVRCGADLSVFYRCAFEGYQDTLYVHSQRQFYKECNIYGTVDFIFGNAAVVFQSCNIYARRPMQKQKNAITAQGNN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2768 91 PANTHER PECTINESTERASE 1 90 - -
Aed1g2768 91 PANTHER PECTINESTERASE 1 90 - -
Aed1g2768 91 ProSitePatterns Pectinesterase signature 2. 52 61 IPR033131 -
Aed1g2768 91 Pfam Pectinesterase 1 90 IPR000070 GO:0030599|GO:0042545
Aed1g2768 91 Gene3D - 1 91 IPR012334 -
Aed1g2768 91 SUPERFAMILY Pectin lyase-like 1 90 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2768 Aed-Chr1 22940919 22941194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2768 1 89 Carbohydrate Esterase AT3G10720 80.899 2.78e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2768 K01051 - gmx:100776412 184.111