Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2767 ATGAGTACCAAAAGTCTTGGCCTAATTATTGTCTTCATATTCTTGTTTTCTCTGTCTTCCCCAACCCTTTCAACAATTTTCTCCAACACCATTGATTTTTGGTGCAACAAAACCCCACATCCTCAAACATGCAAACACTTAGCCGCAACAACCAATCATCAACACCTTCAACATGGCATCCCAAAAAGTGAGTTTCAATTCAAAAACTTCATCCTTAGAATTGCAATGGACCAATCGGTTAAGGCCCAAATTCACATCACGTGGTTAGGGTCAAAATGTAGAAGCAAGGAAGAGAAAGCAGCATGGTCAGATTGCATGACCCTCTATCAAGACACCATCAACATTCTCAACCAAGCACTTAACCCTACTACTACCAAACAAAGCACAAGCTATGATCTCCAAACATGGCTTAGCACAGCCCTAACCAATATCGACACGTGCCAAACCGGGTTCCACGATCTTGGGGTTGGAAACAAAAACAATGTTCTAGCCCTAATTCCCAACAAGAATGTCTCGGACATCATAAGTGATTTTCTGGCCCTAAACAATGCTTCCTCGTTTATTCCTCCAAAGACTAATAATAACAACAAAAATGGCTTCCCAAGATGGTTATCACCCCATGATAGAAAGCTTCTAGAGTCGTCACCAGCATCGTCTTCACCAGACGTTGTGGTGGCTAAAGATGGTTCGGGGGATTTTAAGACCATCGATGAAGCTTTGAAAGCAGTTTCCAAAAAGATGAATCCTCCAAAGAGGTTTGTGATATATGTTAAGCGTGGGATTTACAATGAAAACATTGAGATTGGGAATTCTATGAAGAATGTTATGCTGTATGGTGATGGAACAAGGCTCACCATAATTTCTGGTAGCCGAAGTGTTGGAGGAGGCTCTACCACTTTCAATTCAGCAACCTTTGAGACAGCACCTTGGTGGAAAGCTTTTCTAGCCTGCGCCCCATGA 960 0.4219 MSTKSLGLIIVFIFLFSLSSPTLSTIFSNTIDFWCNKTPHPQTCKHLAATTNHQHLQHGIPKSEFQFKNFILRIAMDQSVKAQIHITWLGSKCRSKEEKAAWSDCMTLYQDTINILNQALNPTTTKQSTSYDLQTWLSTALTNIDTCQTGFHDLGVGNKNNVLALIPNKNVSDIISDFLALNNASSFIPPKTNNNNKNGFPRWLSPHDRKLLESSPASSSPDVVVAKDGSGDFKTIDEALKAVSKKMNPPKRFVIYVKRGIYNENIEIGNSMKNVMLYGDGTRLTIISGSRSVGGGSTTFNSATFETAPWWKAFLACAP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2767 319 PANTHER PECTINESTERASE 9 305 - -
Aed1g2767 319 ProSitePatterns Pectinesterase signature 1. 249 268 IPR018040 -
Aed1g2767 319 SMART PMEI_2 26 181 IPR006501 GO:0004857
Aed1g2767 319 Pfam Pectinesterase 222 307 IPR000070 GO:0030599|GO:0042545
Aed1g2767 319 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 183 IPR035513 -
Aed1g2767 319 SUPERFAMILY Pectin lyase-like 218 306 IPR011050 -
Aed1g2767 319 CDD PMEI-like_3 34 184 - -
Aed1g2767 319 Gene3D - 216 309 IPR012334 -
Aed1g2767 319 PANTHER PECTINESTERASE 9 305 - -
Aed1g2767 319 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 183 IPR006501 GO:0004857
Aed1g2767 319 Pfam Plant invertase/pectin methylesterase inhibitor 30 180 IPR006501 GO:0004857
Aed1g2767 319 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2767 Aed-Chr1 22938209 22939366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2767 9 304 Carbohydrate Esterase AT2G45220 45.973 2.90e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2767 K01051 - gmx:100776412 475.707