Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2766 ATGGAAACCCTTATTAGAAAAACATTGATCATCACACTCTTATTTCTATCTTCAATTTTCTCAATAGCCTCATCAAGAAGAGGACCAGCTCCATCCAGCAACATAGATTGGTGGTGCAACCTAACCCCACACCCTATACCATGCAAACACTACATCACTACACAAATGAAGAGCCACCATTTCTCATCAATCAAACACAAAACTATCTTCCGGGGAATACTTGTTGAACATGCCCTAAACCAAGCCATAATCATGCAAAAAGAAGCACTACATGACTACTCTTACCAAAACAACAACAACAACAACATGGCAACAAAGAACCACAGAACCGTGCATGGTGATTGCTTGAAGCTCTATGGAAAAACCATCTTTCACCTCGACCGAACCCTCGAATGCTTTCGAGGGAATCAAAACTGTTCGTCAGATGATGCACAAACATGGCTCAGCACTGCCCTCACAAACATTCAAACGTGTCAAACTGGCATGGTTGAACTTGGTGTTGAAGATTACAAGGTTGTTCCAAAAAACAATGTTTCTGAGATGATAAGGAACAGCTTGGCCATCAACATGGACTTCATGAAACACAGCCATCATCAGAATCAGAAGGAAGAGGAAACAAAAGATGCATTATTTCCAAGATGGTTTTCAACGCATGAGAGGAAACTGTTGCAGGCTTCAACGATAAAGGCACATGTTGTGGTGGCGAAAGATGGTTCTGGGAATTTCAGGAAAGTGCAAGATGCTTTGGATGCTGCTGCAAAGAGGAGAGTGAAAACAAGGTTTGTGATACATGTGAAGAAAGGAGTGTATAGAGAGAATATTGAGGTTGCTGTGAAGAATGATAACATAATGCTGGTTGGTGATGGTTTGATAAATACTGTAATCACAGGTGCCAGAAGTGTTCAAGATGGTTACACAACCTATAGTTCTGCAACTGCTAGCATAGATGGCCTCCACTTCATTGCACGAGACATCACCTTCCAAAACACTGCCGGTCCTCAAAAGGGTCAAGCCGTGGCACTCCGGTCGGCCTCGGACCTCTCCGTCTTCTACCGATGTGCCATCATGGGCTACCAAGACACCCTCATGACTCATGCACAACGCCAATTCTACCGCCAATGTTACATCTATGGCACCGTTGACTTCATCTTTGGCAATGCCGCAGTAGTGTTCCAAAATTGTTACATTTACGCAAGAAAACCCTTAGAGGGCCAAGCCAACATGATCACGGCCCAAGGCCGGGGTGACCCGTTCCAAAACACCGGGATTTCAATCCACAACTCTCAAATCCGGGCCGCCCCAGACCTAAAGCCCGTTGTTGACAAATACAACACTTTCTTGGGTAGGCCATGGCAACAATACTCTAGAGTTGTGGTCATGAAAACTTTCATGGACACCTTGGTGAGCCCATTGGGTTGGTCTCCATGGGATGATTCTAATTTTGCTCAAGATACACTTTATTATGGAGAGTATCAAAATTATGGGCCTGGAGCATCCACTACCAATAGAGTAAAATGGCCCGGTTTTCATGTGATTACAAGCCCAACTGAAGCGTCTCAGTTTACAGTCACGCGCCTCCTTGCTGGCCCAACATGGTTGGGTTCTACAGCCGTGCCATTCACCTCTGGTCTTTGA 1635 0.4483 METLIRKTLIITLLFLSSIFSIASSRRGPAPSSNIDWWCNLTPHPIPCKHYITTQMKSHHFSSIKHKTIFRGILVEHALNQAIIMQKEALHDYSYQNNNNNNMATKNHRTVHGDCLKLYGKTIFHLDRTLECFRGNQNCSSDDAQTWLSTALTNIQTCQTGMVELGVEDYKVVPKNNVSEMIRNSLAINMDFMKHSHHQNQKEEETKDALFPRWFSTHERKLLQASTIKAHVVVAKDGSGNFRKVQDALDAAAKRRVKTRFVIHVKKGVYRENIEVAVKNDNIMLVGDGLINTVITGARSVQDGYTTYSSATASIDGLHFIARDITFQNTAGPQKGQAVALRSASDLSVFYRCAIMGYQDTLMTHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCYIYARKPLEGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLKPVVDKYNTFLGRPWQQYSRVVVMKTFMDTLVSPLGWSPWDDSNFAQDTLYYGEYQNYGPGASTTNRVKWPGFHVITSPTEASQFTVTRLLAGPTWLGSTAVPFTSGL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2766 544 Pfam Plant invertase/pectin methylesterase inhibitor 34 188 IPR006501 GO:0004857
Aed1g2766 544 ProSitePatterns Pectinesterase signature 2. 376 385 IPR033131 -
Aed1g2766 544 SUPERFAMILY Pectin lyase-like 226 543 IPR011050 -
Aed1g2766 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 189 IPR035513 -
Aed1g2766 544 CDD PMEI-like_3 37 194 - -
Aed1g2766 544 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 189 IPR006501 GO:0004857
Aed1g2766 544 SMART PMEI_2 30 188 IPR006501 GO:0004857
Aed1g2766 544 PANTHER PECTINESTERASE 7 543 - -
Aed1g2766 544 Gene3D - 224 544 IPR012334 -
Aed1g2766 544 PANTHER PECTINESTERASE 7 543 - -
Aed1g2766 544 Pfam Pectinesterase 231 529 IPR000070 GO:0030599|GO:0042545
Aed1g2766 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2766 Aed-Chr1 22934603 22936969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2766 32 544 Carbohydrate Esterase AT5G51500 54.143 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2766 K01051 - gmx:100800413 909.442