Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2764 ATGGCACCCTTTCTTTTCCTTCTCCTCTGCACACTTGTCCAAATCTCATCCTCATCCACAACCACAACCCCAAGCAGCTTCATAAAATCGTCCTGCAGCACAACCCAGTACCCAGCCCTATGCGTCTCCTCGCTCTCCGTCTACGCCGCCACCATCCAGCAGGACCCACACCAGCTCGTCCAGACCGCTCTCTCCCTCACCCTCAATGCCACCGCCTCCACCAAGACCTTCGTCGCCAAATGCTCCAAATTCACCGGCCTCAAGCCGCGCGAGTACGCCGCCCTCAAAGACTGCGCCGAGGAGATCAGCGACAGTGTTGACCGCCTCAGCCGCTCGCTCAAGGAGCTCAAACTCTGTAAGGCCAAAGCCGAGGACTTCTCGTGGCACATCAGCAACGTCGAGACTTGGGTCAGTGCGGCGCTCACTGACGAGTCCACTTGCGGCGATGGCTTTGGCGGGAAGGGCCTCAATGGGAAGATTAAGGACGCCATCAGGGGTAGGATGGTCAATGTTGCCAAGGTTACCAGCAACGCTCTCTCGCTTATTAATCAGTATGCTGCGCAGCACTAG 570 0.5754 MAPFLFLLLCTLVQISSSSTTTTPSSFIKSSCSTTQYPALCVSSLSVYAATIQQDPHQLVQTALSLTLNATASTKTFVAKCSKFTGLKPREYAALKDCAEEISDSVDRLSRSLKELKLCKAKAEDFSWHISNVETWVSAALTDESTCGDGFGGKGLNGKIKDAIRGRMVNVAKVTSNALSLINQYAAQH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2764 189 CDD PMEI-like_3 30 187 - -
Aed1g2764 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 181 IPR006501 GO:0004857
Aed1g2764 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 185 IPR035513 -
Aed1g2764 189 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 189 - -
Aed1g2764 189 SMART PMEI_2 23 181 IPR006501 GO:0004857
Aed1g2764 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 185 IPR006501 GO:0004857
Aed1g2764 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 185 IPR035513 -
Aed1g2764 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2764 Aed-Chr1 22919886 22920455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2764 21 182 Carbohydrate Esterase AT3G14310 32.121 6.51e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2764 - - gmx:100305900 293.893