Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2756 ATGCTATCAAAGGAAGTTCCATCAGAGTTCCCTCATCCAGCTTTTGCAATCAATCTTGTTAGGGATGAGATGAGCCGTAGTGATTGGATTTCTATGGTTGCTGGGCATAGTGATTCGTGGTTACTTTCTGTGGCCTTTTGCCTTGCAACTCTACTTTACAATATGCTATCTTGGATTGAAAACCATATTTTCCCTTCAACTAGAAATTTTTGGAATTGCCAAGGAGAGAAAATGAAACTTTTATTTGATTCGATCAACATTCTTCCAACCATTTCTCAAGTTGTGACTGGCAATAAACCAATTACGGGAAGCATCGAGGTAGTTGCAGATGAAAATGAGCATATTCAATTAGATTGTGGAAGTTGTGGTGGAAATTGCAACAAAGATGATTTTGGATTGGCTGTGATGTTTGCGAGAGGCGGTACCATGGAAAATGTGTTATGA 444 0.3896 MLSKEVPSEFPHPAFAINLVRDEMSRSDWISMVAGHSDSWLLSVAFCLATLLYNMLSWIENHIFPSTRNFWNCQGEKMKLLFDSINILPTISQVVTGNKPITGSIEVVADENEHIQLDCGSCGGNCNKDDFGLAVMFARGGTMENVL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2756 147 Pfam Alfin 3 50 IPR021998 GO:0006355|GO:0042393
Aed1g2756 147 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 1 3 135 - -
Aed1g2756 147 PANTHER CPG BINDING PROTEIN 3 135 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2756 Aed-Chr1 22852754 22853958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2756 15 131 Alfin-like Transcription Factor Family AT5G05610 34.694 5.03e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2756 - - gmx:100817101 122.479