Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2740 ATGGCTGGGATTGATGATAATGTCGCCCTTACCGGCGATTGGGGTCTCGCTAGCCCAAGTCCTAGGACCTTCTTCTCTAGAATGTTGGAAGAAGATAGTGTGACAAGATCAATCTCAGAACATTCTGGAAGTGGTAGTAGAATTGGGGATCTCTTCTCAGGACATCGCGAGCCTAGTGAGACGGGGAATGAAAACATGAAAGAGAAGGCACAAGATGGTGATTTCAGAGGCCAATTGACTGATGTGAGCTTTCAGACTGAGCAGAAGTCGAGCTCCTCTCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGAGCTGGGTTTAACGCTCCGAGGTTGAATACAGAAAGCATTAGCAGATCTACTGACCTTTCGCTTAATTCTGACATTCAGTCTCCTTACTTGACCATCCCACCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTTTTTCTTGCTAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTCCTCTTCATGTCAAATGGCAACATGCGGAATTCACAAGTATCATCTGATGCTTCAGAAAAATATAATGATAATGGCTTTAATGACATTTATACATCAGCCTTTGCTTTCAAGCCTGCAACAGATTCAGGGTCCTCTTTTTATCATGGTGCTGGAAGAAAAATGAATCCGTCTACACTTCCTCAACAATCCCTTTCGGCTCAGACAGAAAATTCTTTTCAATCTCAAAGTGTTGATACTGTCAAAGTTCAAACTGAGAACAAAACTGGCCTTCAACTTCAGGCAGACTTTGCTGAATCACCTCCTCAAAAGGATAATGGAATTAAAATGTTCTCAGCTGACCAAAGGGCTTTTGATGCTGTTGGCGGCAGCAGTGTTGAGCATTCTACACCAATTGAAGAGCAAGCAGATGAAGAAGGAGATCAAAGAGGCAATGGAGACTCCATAGCCGGCAGTGTTGGTGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAGGGCAGCGAGTTCCCTCGAAGCTACTACAAGTGTACACATCCGAACTGTCAGGTTAAGAAGAAAGTGGAACGATCTCATGAGGGCCACATAACTGAGATCATCTACAAGGGAATGCACAACCATCCGAAACCTCCTCCAAATCGCCGGTCAGGTATAGGTTTGATTAACCTTCATACTACTGACATGCAAGTGGACAACCCTGAACACGTTGAGCCACACAATGGTGGCGATGGTGACCAGGGCTGGGCTAATGTGCAAAAGGGAAATATAGCTGCTGGAGCTGCTAATTGGAAGCAGCATGACAACCTTGAAGCCACATCATCAGCTTCTGTTGGCCCTGAATACTGCAACCAGTCCCCCAATTTGCAGACTCAAAATGGTACTCACTTAGATTCAGGAGAGGCAGTGGATGCCTCGTCTACTTTTTCTAATGAAGAAGAAGAAGAAGAAGATGATCAAGGCACTCATGGTAGTGTATCGTTAGGGTATGATGGGGAAGGAGATGAATCTGAGTCTAAGAGAAGGTACTTGAAGCTGGAATCATATGCAGAGTTGAGTGGAGCTACTAGAGCCATTCGCGAACCTAGAGTTGTTGTACAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGGCAAAAAGTTGTCAAAGGAAATCCCAATCCAAGGCCTGAACCGTCTCAAGTGCACAATGGCATTGGGAGGCTCGAGAGGCCTTCCCTTGGCTCATTCAACCTACCCGGGAGGCAGCAGCTAGGAGGACCTCCCCATCGTGGCTTCTCCTTTGGTATGAACCAATCCATGCTATCAAATCTGGCGATGTCAGGGTTAGGCCACACACAAGCAAAGCTTCCTGGCATGCCGGTTCATCCATTCTTGGCAGCGCAGCAGCAGCAACATCATCATCAACAACAACAACAACAACATCATCATCATCATCAACAACAACAACATCATCTTCATCAGCAGCAGCAGCAGCAACAACACCAACAACAACAACGTTCTGCAAATGATTTGGGTTTCATGTTGCCAAAGGGAGAGCCAAATGCAGAGGCTATTCCGGAACGTGGTGGTGGTGGCCTTAACCTGTCAAATGGCTCATCAATGTACCAAGAAATCATGAGTCACATGCCTCTTGGACCTCATATGTAA 2184 0.4592 MAGIDDNVALTGDWGLASPSPRTFFSRMLEEDSVTRSISEHSGSGSRIGDLFSGHREPSETGNENMKEKAQDGDFRGQLTDVSFQTEQKSSSSRGGLVERMAARAGFNAPRLNTESISRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRNSQVSSDASEKYNDNGFNDIYTSAFAFKPATDSGSSFYHGAGRKMNPSTLPQQSLSAQTENSFQSQSVDTVKVQTENKTGLQLQADFAESPPQKDNGIKMFSADQRAFDAVGGSSVEHSTPIEEQADEEGDQRGNGDSIAGSVGGAPSEDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGMHNHPKPPPNRRSGIGLINLHTTDMQVDNPEHVEPHNGGDGDQGWANVQKGNIAAGAANWKQHDNLEATSSASVGPEYCNQSPNLQTQNGTHLDSGEAVDASSTFSNEEEEEEDDQGTHGSVSLGYDGEGDESESKRRYLKLESYAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRPEPSQVHNGIGRLERPSLGSFNLPGRQQLGGPPHRGFSFGMNQSMLSNLAMSGLGHTQAKLPGMPVHPFLAAQQQQHHHQQQQQQHHHHHQQQQHHLHQQQQQQQHQQQQRSANDLGFMLPKGEPNAEAIPERGGGGLNLSNGSSMYQEIMSHMPLGPHM 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2740 727 MobiDBLite consensus disorder prediction 648 662 - -
Aed1g2740 727 MobiDBLite consensus disorder prediction 403 422 - -
Aed1g2740 727 MobiDBLite consensus disorder prediction 638 705 - -
Aed1g2740 727 MobiDBLite consensus disorder prediction 213 246 - -
Aed1g2740 727 ProSiteProfiles WRKY domain profile. 324 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 ProSiteProfiles WRKY domain profile. 541 567 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 SUPERFAMILY WRKY DNA-binding domain 538 567 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 MobiDBLite consensus disorder prediction 221 246 - -
Aed1g2740 727 MobiDBLite consensus disorder prediction 446 510 - -
Aed1g2740 727 MobiDBLite consensus disorder prediction 446 478 - -
Aed1g2740 727 Pfam WRKY DNA -binding domain 547 567 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 Pfam WRKY DNA -binding domain 324 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 MobiDBLite consensus disorder prediction 285 329 - -
Aed1g2740 727 Gene3D WRKY domain 315 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 SUPERFAMILY WRKY DNA-binding domain 322 382 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 Gene3D WRKY domain 533 574 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 SMART WRKY_cls 323 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 SMART WRKY_cls 546 576 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g2740 727 MobiDBLite consensus disorder prediction 34 73 - -
Aed1g2740 727 MobiDBLite consensus disorder prediction 663 682 - -
Aed1g2740 727 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 90 567 - -
Aed1g2740 727 MobiDBLite consensus disorder prediction 559 605 - -
Aed1g2740 727 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 567 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2740 Aed-Chr1 22714618 22719310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2740 598 638 WRKY Transcription Factor Family AT5G56270 53.659 4.24e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed1g2740 WRKY 5.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2740 K18835 - gmx:100796545 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2740 1 22714618 22719310 Aed1g2740 1 22714618 22719310 ECH