Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g2740 | ATGGCTGGGATTGATGATAATGTCGCCCTTACCGGCGATTGGGGTCTCGCTAGCCCAAGTCCTAGGACCTTCTTCTCTAGAATGTTGGAAGAAGATAGTGTGACAAGATCAATCTCAGAACATTCTGGAAGTGGTAGTAGAATTGGGGATCTCTTCTCAGGACATCGCGAGCCTAGTGAGACGGGGAATGAAAACATGAAAGAGAAGGCACAAGATGGTGATTTCAGAGGCCAATTGACTGATGTGAGCTTTCAGACTGAGCAGAAGTCGAGCTCCTCTCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGAGCTGGGTTTAACGCTCCGAGGTTGAATACAGAAAGCATTAGCAGATCTACTGACCTTTCGCTTAATTCTGACATTCAGTCTCCTTACTTGACCATCCCACCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTTTTTCTTGCTAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTCCTCTTCATGTCAAATGGCAACATGCGGAATTCACAAGTATCATCTGATGCTTCAGAAAAATATAATGATAATGGCTTTAATGACATTTATACATCAGCCTTTGCTTTCAAGCCTGCAACAGATTCAGGGTCCTCTTTTTATCATGGTGCTGGAAGAAAAATGAATCCGTCTACACTTCCTCAACAATCCCTTTCGGCTCAGACAGAAAATTCTTTTCAATCTCAAAGTGTTGATACTGTCAAAGTTCAAACTGAGAACAAAACTGGCCTTCAACTTCAGGCAGACTTTGCTGAATCACCTCCTCAAAAGGATAATGGAATTAAAATGTTCTCAGCTGACCAAAGGGCTTTTGATGCTGTTGGCGGCAGCAGTGTTGAGCATTCTACACCAATTGAAGAGCAAGCAGATGAAGAAGGAGATCAAAGAGGCAATGGAGACTCCATAGCCGGCAGTGTTGGTGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAGGGCAGCGAGTTCCCTCGAAGCTACTACAAGTGTACACATCCGAACTGTCAGGTTAAGAAGAAAGTGGAACGATCTCATGAGGGCCACATAACTGAGATCATCTACAAGGGAATGCACAACCATCCGAAACCTCCTCCAAATCGCCGGTCAGGTATAGGTTTGATTAACCTTCATACTACTGACATGCAAGTGGACAACCCTGAACACGTTGAGCCACACAATGGTGGCGATGGTGACCAGGGCTGGGCTAATGTGCAAAAGGGAAATATAGCTGCTGGAGCTGCTAATTGGAAGCAGCATGACAACCTTGAAGCCACATCATCAGCTTCTGTTGGCCCTGAATACTGCAACCAGTCCCCCAATTTGCAGACTCAAAATGGTACTCACTTAGATTCAGGAGAGGCAGTGGATGCCTCGTCTACTTTTTCTAATGAAGAAGAAGAAGAAGAAGATGATCAAGGCACTCATGGTAGTGTATCGTTAGGGTATGATGGGGAAGGAGATGAATCTGAGTCTAAGAGAAGGTACTTGAAGCTGGAATCATATGCAGAGTTGAGTGGAGCTACTAGAGCCATTCGCGAACCTAGAGTTGTTGTACAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGGCAAAAAGTTGTCAAAGGAAATCCCAATCCAAGGCCTGAACCGTCTCAAGTGCACAATGGCATTGGGAGGCTCGAGAGGCCTTCCCTTGGCTCATTCAACCTACCCGGGAGGCAGCAGCTAGGAGGACCTCCCCATCGTGGCTTCTCCTTTGGTATGAACCAATCCATGCTATCAAATCTGGCGATGTCAGGGTTAGGCCACACACAAGCAAAGCTTCCTGGCATGCCGGTTCATCCATTCTTGGCAGCGCAGCAGCAGCAACATCATCATCAACAACAACAACAACAACATCATCATCATCATCAACAACAACAACATCATCTTCATCAGCAGCAGCAGCAGCAACAACACCAACAACAACAACGTTCTGCAAATGATTTGGGTTTCATGTTGCCAAAGGGAGAGCCAAATGCAGAGGCTATTCCGGAACGTGGTGGTGGTGGCCTTAACCTGTCAAATGGCTCATCAATGTACCAAGAAATCATGAGTCACATGCCTCTTGGACCTCATATGTAA | 2184 | 0.4592 | MAGIDDNVALTGDWGLASPSPRTFFSRMLEEDSVTRSISEHSGSGSRIGDLFSGHREPSETGNENMKEKAQDGDFRGQLTDVSFQTEQKSSSSRGGLVERMAARAGFNAPRLNTESISRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRNSQVSSDASEKYNDNGFNDIYTSAFAFKPATDSGSSFYHGAGRKMNPSTLPQQSLSAQTENSFQSQSVDTVKVQTENKTGLQLQADFAESPPQKDNGIKMFSADQRAFDAVGGSSVEHSTPIEEQADEEGDQRGNGDSIAGSVGGAPSEDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGMHNHPKPPPNRRSGIGLINLHTTDMQVDNPEHVEPHNGGDGDQGWANVQKGNIAAGAANWKQHDNLEATSSASVGPEYCNQSPNLQTQNGTHLDSGEAVDASSTFSNEEEEEEDDQGTHGSVSLGYDGEGDESESKRRYLKLESYAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRPEPSQVHNGIGRLERPSLGSFNLPGRQQLGGPPHRGFSFGMNQSMLSNLAMSGLGHTQAKLPGMPVHPFLAAQQQQHHHQQQQQQHHHHHQQQQHHLHQQQQQQQHQQQQRSANDLGFMLPKGEPNAEAIPERGGGGLNLSNGSSMYQEIMSHMPLGPHM | 727 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 648 | 662 | - | - | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 403 | 422 | - | - | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 638 | 705 | - | - | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 213 | 246 | - | - | |
Aed1g2740 | 727 | ProSiteProfiles | WRKY domain profile. | 324 | 382 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | ProSiteProfiles | WRKY domain profile. | 541 | 567 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | SUPERFAMILY | WRKY DNA-binding domain | 538 | 567 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 221 | 246 | - | - | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 446 | 510 | - | - | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 446 | 478 | - | - | |
Aed1g2740 | 727 | Pfam | WRKY DNA -binding domain | 547 | 567 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | Pfam | WRKY DNA -binding domain | 324 | 380 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 285 | 329 | - | - | |
Aed1g2740 | 727 | Gene3D | WRKY domain | 315 | 383 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | SUPERFAMILY | WRKY DNA-binding domain | 322 | 382 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | Gene3D | WRKY domain | 533 | 574 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | SMART | WRKY_cls | 323 | 381 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | SMART | WRKY_cls | 546 | 576 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 34 | 73 | - | - | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 663 | 682 | - | - | |
Aed1g2740 | 727 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 90 | 567 | - | - | |
Aed1g2740 | 727 | MobiDBLite | consensus disorder prediction | 559 | 605 | - | - | |
Aed1g2740 | 727 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 90 | 567 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g2740 | Aed-Chr1 | 22714618 | 22719310 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g2740 | 598 | 638 | WRKY Transcription Factor Family | AT5G56270 | 53.659 | 4.24e-06 | 48.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed1g2740 | WRKY | 5.8e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g2740 | K18835 | - | gmx:100796545 | 973 |