Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2726 ATGACTTCAGTATACTCACTCGTGTTGCTCCTGTTTGGGGTGGTGGTTCTGAGCACTCCGGTGTTGGCTAATTTCTTTCCACCAATTTATGAGCCTCCCCCAATTGAAAAACCACCCATATATGAATCTCCACCATTCTTTAAGCCTCCATTCTACCCTCCACCAGCGTACCAGCCTCCATATGAAAAGTCACCACCAATGTACCAACCCCCTAACGAGAAACTACCACCAGTGTATGAACCTCCTCATGAGAAACCACCACCAATGTACCAACCCCCTAACGAGAAACCACCACCAATGTATGAACCTCCTCATGAGAAACCACCACCAGTATACCAACCTCCAAACGAGAAACCACCACCAGTGTATGAACCTCCTCATGAGAAACCACCACCAGTGTATCAACCCCCAAACGAAAAACCACCACCAGTGTATGAACCTCCACATGAGAAGCCACCACCAATGTACCAACCCCCTAACGAGAAACCACCACCAATGTATGAACCTCCTCATGAAAAACCACCACCAGTGTACCAACCCCCAAACGAAAAACCACCACCAGTGTATGAACCTCCACATGAGAAGCCACCACCAATGTACCAACCCCCTAACGAGAAACCACCACCAATGTATGAACCTCCTCATGAAAAACCACCACCCGTGTACCAACCCCCTAACGAGAAACCACCACCAGTGTACCAACCCCCTAATGAGAAACCACCACCAGTGTATCAACCCCCTAACGAGAAACCACCACCAGTGTATCAACCCCCTAATGTGAAACCACCACCAGTGTACCAACCCCCTAACGAGAAACCACCACCGGTGTATCAACCCCCTAATGAGAAACCACCACCAATATATCAACCTCCTCATGAGAAGCCACCACCAGTGTACCAACCCCCTTATGAGAAACCACCCCCAGTGTACCAACCCCCATATGAGAAACCACCTCCAATATATCAACCCCCTTATAAGAAGCCACCTCCATTAGTATGTCCACCACCAGTGTATCAACCTCCTTATAAGAAACCACCACCAGTGTACCAACCCCCAAACGAGAAACCACCACCAGTATATCAACCTCCACATGAGAAGTCACCACCAGTATATCAACCTCCTCATAAAAAACCACCACCAGTGTACCAACCTCCTAATGAGAAACCACCACCAGTTTATCAACCTCCACATGAGAAGCCACCACCAGTGTACCAACCTCCTAACGAGAAACCACCACCAGTGTACCAACCTCCTAACGAGAAACCACCTCCAGTATATCAACCCCCTTATAAGAAGCCACCTCCATTAGTATGTCCACCACCAGTGTATCAACCTCCTTATGAGAAACCACCACCAGTGTACCAACCCCCAAACGAGAAACCACCACCAGTATATCAACCTCCACATGAGAAGTCACCACCAATATATCAACCTCCTAATGAGAAACCACCACCAGTTTATCAACCTCCACATGAGAAGCCACCACCAGTGTACCAACCTCCTAACGAGAAACCACCACCAGTATATCAACCTCCACATGAGAAGTCACCACCAATATATCAACCTCCTCATAAAAAATCACCACCAGTGTACCAACCTCCTAATGAGAAACCACCACCAGTTTATCAACCTCCACATGAGAAGCCACCACCAGTGTACCAACCTCCTAACGAGAAACCACCACCAGTGTATCAACCTCCACATGAGAAGCCACCACCAGTATACCAACCTCCTTATGAAAAACCACCACCAGTATACAAACCTCCTAACGAGAAACCACCACCTATATATCAACCCCCTTATAAGAAGCCACCACCTATAGTGTGTCCACCGCCAGTGTATCAACCTCCTTATGAGAAACCACCACCGGTGTACCAGCCTCCACATGAGAAGCCACCCTTTTACAAACCTCCTTTTGAAAAACCACCATTATACCAACCACCTCCTTTAGTGAAGCCACCACCCTTTTACAAACCTCCTTTCAAGAAACCACCAATATACGTGCCACCTTCTTTGGTGAAGCCACCAATTTACAATCCCCCACCTTATGGCCACTATCCACCATCCAAGAAAAACTAA 2079 0.4772 MTSVYSLVLLLFGVVVLSTPVLANFFPPIYEPPPIEKPPIYESPPFFKPPFYPPPAYQPPYEKSPPMYQPPNEKLPPVYEPPHEKPPPMYQPPNEKPPPMYEPPHEKPPPVYQPPNEKPPPVYEPPHEKPPPVYQPPNEKPPPVYEPPHEKPPPMYQPPNEKPPPMYEPPHEKPPPVYQPPNEKPPPVYEPPHEKPPPMYQPPNEKPPPMYEPPHEKPPPVYQPPNEKPPPVYQPPNEKPPPVYQPPNEKPPPVYQPPNVKPPPVYQPPNEKPPPVYQPPNEKPPPIYQPPHEKPPPVYQPPYEKPPPVYQPPYEKPPPIYQPPYKKPPPLVCPPPVYQPPYKKPPPVYQPPNEKPPPVYQPPHEKSPPVYQPPHKKPPPVYQPPNEKPPPVYQPPHEKPPPVYQPPNEKPPPVYQPPNEKPPPVYQPPYKKPPPLVCPPPVYQPPYEKPPPVYQPPNEKPPPVYQPPHEKSPPIYQPPNEKPPPVYQPPHEKPPPVYQPPNEKPPPVYQPPHEKSPPIYQPPHKKSPPVYQPPNEKPPPVYQPPHEKPPPVYQPPNEKPPPVYQPPHEKPPPVYQPPYEKPPPVYKPPNEKPPPIYQPPYKKPPPIVCPPPVYQPPYEKPPPVYQPPHEKPPFYKPPFEKPPLYQPPPLVKPPPFYKPPFKKPPIYVPPSLVKPPIYNPPPYGHYPPSKKN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2726 692 PANTHER - 183 274 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 121 225 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 547 622 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 183 274 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 391 495 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 580 688 - -
Aed1g2726 692 MobiDBLite consensus disorder prediction 57 322 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 268 433 - -
Aed1g2726 692 PRINTS Proline rich extensin signature 20 36 - -
Aed1g2726 692 PRINTS Proline rich extensin signature 55 76 - -
Aed1g2726 692 PRINTS Proline rich extensin signature 107 124 - -
Aed1g2726 692 PRINTS Proline rich extensin signature 82 98 - -
Aed1g2726 692 PRINTS Proline rich extensin signature 42 54 - -
Aed1g2726 692 PANTHER - 4 164 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 449 550 - -
Aed1g2726 692 MobiDBLite consensus disorder prediction 447 600 - -
Aed1g2726 692 PANTHER - 547 622 - -
Aed1g2726 692 PANTHER - 391 495 - -
Aed1g2726 692 PANTHER - 121 225 - -
Aed1g2726 692 PANTHER - 449 550 - -
Aed1g2726 692 PANTHER - 492 589 - -
Aed1g2726 692 PANTHER - 580 688 - -
Aed1g2726 692 PANTHER - 268 433 - -
Aed1g2726 692 MobiDBLite consensus disorder prediction 343 430 - -
Aed1g2726 692 MobiDBLite consensus disorder prediction 620 647 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 4 164 - -
Aed1g2726 692 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 492 589 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2726 406 578 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT1G62970 42.541 1.83e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2726 - - var:108342340 203.371