Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2725 ATGGATTCATCTTCTTCCTTCTTCAATTCACCCTCTCCCGATTTATCTTCCCAGTCTTCCTCTCCAGAAGCCTTCTCGTGGGAGGGGTACCTCCCCTTCAATGAGAACGATCCGGAGGAGATGCTTTTATACGGCATGATCGCCGGCGCCACCGCCGTGGAGCACTCACCGAGCTCGGAGGAGAGTAGGGCGGCGCGGAAGGAGAAGTCGTACCGCGGCGTGCGGCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGGGACTCGACGCGGCACGGGATGAGGGTGTGGCTGGGGACATTTGACAGCGCCGAAGCGGCGGCTTTGGCTTACGACCAAGCTGCGTTCTCCATGCGTGGCTCGGCGGCGATTCTGAACTTCCCCGTGGAGATGGTAAGAGAGTCGCTTAAAGAGATGAACTATGGTAACGATTCTTCCGAAGAAGGGTGCTCCCCTGTCGTGGCTCTCAAGAGGAAACACTCCCTTAGAAGGAAAATCAACGTCAAGAAGAACACCAAACAAAGTAGTAATAGTAGCAGTAGTACCGTAGATAATGCTGTCGTGTTTGAAGACCTTGGTCCTGATTACTTGGAACAGCTTTTGATGTCCTCTGATCATCATATTCCCACCACCTTCTGA 639 0.5446 MDSSSSFFNSPSPDLSSQSSSPEAFSWEGYLPFNENDPEEMLLYGMIAGATAVEHSPSSEESRAARKEKSYRGVRRRPWGKFAAEIRDSTRHGMRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVEMVRESLKEMNYGNDSSEEGCSPVVALKRKHSLRRKINVKKNTKQSSNSSSSTVDNAVVFEDLGPDYLEQLLMSSDHHIPTTF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2725 212 MobiDBLite consensus disorder prediction 1 24 - -
Aed1g2725 212 CDD AP2 69 129 IPR001471 GO:0003700|GO:0006355
Aed1g2725 212 Gene3D AP2/ERF domain 69 130 IPR036955 GO:0003700|GO:0006355
Aed1g2725 212 PANTHER DNA-BINDING DOMAIN 26 203 IPR044808 GO:0003700|GO:0009873
Aed1g2725 212 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 26 203 - -
Aed1g2725 212 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Aed1g2725 212 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Aed1g2725 212 SUPERFAMILY DNA-binding domain 70 130 IPR016177 GO:0003677
Aed1g2725 212 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Aed1g2725 212 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Aed1g2725 212 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2725 Aed-Chr1 22553568 22554206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2725 31 206 AP2-EREBP Transcription Factor Family AT3G23240 63.736 4.31e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed1g2725 AP2 6.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2725 K14516 - gmx:100790598 343.584