Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g2724 | ATGATGGAGGGCGGGAAGGTGCAGGGGAAGGAGGAGGTGCGGTACCGCGGCGTGCGACGGAGGCCATGGGGGAAATACGCGGCGGAGATAAGGGATCCGTCGAAGCAAGGGTCGAGGCTGTGGCTGGGGACATTCGACACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCTTTTAACCTAAGGGGCCATCTTGCAATTCTGAATTTTCCGAGTGAGTACTATTCTCAGATAAGAGGTTCACCACCGTATCCACCTCATTTAGCAACACCCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTGGTGCACAGCAGAGGCATGTTTTTGAGATACCGTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGGTCACTCAGAGGACCACAAGAAGAAAAACAAGGGAGACTGA | 414 | 0.5145 | MMEGGKVQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLATPSASSSSSSSSGAQQRHVFEIPCLDDKVLEDLLGHSEDHKKKNKGD | 137 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g2724 | 137 | Pfam | AP2 domain | 14 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2724 | 137 | PANTHER | ETHYLENE RESPONSE FACTOR | 4 | 128 | - | - | |
Aed1g2724 | 137 | MobiDBLite | consensus disorder prediction | 80 | 107 | - | - | |
Aed1g2724 | 137 | Gene3D | AP2/ERF domain | 13 | 73 | IPR036955 | GO:0003700|GO:0006355 | |
Aed1g2724 | 137 | PRINTS | Ethylene responsive element binding protein signature | 15 | 26 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2724 | 137 | PRINTS | Ethylene responsive element binding protein signature | 38 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2724 | 137 | ProSiteProfiles | AP2/ERF domain profile. | 14 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2724 | 137 | PANTHER | DNA-BINDING DOMAIN | 4 | 128 | IPR044808 | GO:0003700|GO:0009873 | |
Aed1g2724 | 137 | CDD | AP2 | 14 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2724 | 137 | SMART | rav1_2 | 14 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2724 | 137 | MobiDBLite | consensus disorder prediction | 91 | 107 | - | - | |
Aed1g2724 | 137 | SUPERFAMILY | DNA-binding domain | 14 | 73 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g2724 | Aed-Chr1 | 22536555 | 22536968 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g2724 | 12 | 132 | AP2-EREBP Transcription Factor Family | AT3G23230 | 64.516 | 2.18e-49 | 153 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Aed1g2724 | AP2 | 4.9e-17 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g2724 | - | - | gmx:100776376 | 243.817 |