Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2724 ATGATGGAGGGCGGGAAGGTGCAGGGGAAGGAGGAGGTGCGGTACCGCGGCGTGCGACGGAGGCCATGGGGGAAATACGCGGCGGAGATAAGGGATCCGTCGAAGCAAGGGTCGAGGCTGTGGCTGGGGACATTCGACACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCTTTTAACCTAAGGGGCCATCTTGCAATTCTGAATTTTCCGAGTGAGTACTATTCTCAGATAAGAGGTTCACCACCGTATCCACCTCATTTAGCAACACCCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTGGTGCACAGCAGAGGCATGTTTTTGAGATACCGTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGGTCACTCAGAGGACCACAAGAAGAAAAACAAGGGAGACTGA 414 0.5145 MMEGGKVQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLATPSASSSSSSSSGAQQRHVFEIPCLDDKVLEDLLGHSEDHKKKNKGD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2724 137 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
Aed1g2724 137 PANTHER ETHYLENE RESPONSE FACTOR 4 128 - -
Aed1g2724 137 MobiDBLite consensus disorder prediction 80 107 - -
Aed1g2724 137 Gene3D AP2/ERF domain 13 73 IPR036955 GO:0003700|GO:0006355
Aed1g2724 137 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Aed1g2724 137 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Aed1g2724 137 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
Aed1g2724 137 PANTHER DNA-BINDING DOMAIN 4 128 IPR044808 GO:0003700|GO:0009873
Aed1g2724 137 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Aed1g2724 137 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Aed1g2724 137 MobiDBLite consensus disorder prediction 91 107 - -
Aed1g2724 137 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2724 Aed-Chr1 22536555 22536968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2724 12 132 AP2-EREBP Transcription Factor Family AT3G23230 64.516 2.18e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed1g2724 AP2 4.9e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2724 - - gmx:100776376 243.817