Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2723 ATGGATGAAGAAGGTTCAAGGGGGAGGGGCAAGGAGGACGGCCGAGACGTCCGGTACCGGGGGGTACGGAGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGAGACTCGACAAGGCAGGGCCAGAGGGTGTGGCTGGGGACTTTCAACACGGCAGAGGAAGCAGCCAGAGCCTATGATAGAGCAGCTTATGCCATGAGAGGTCCATTTGCAATCCTTAACTTTCCTGATGAGTACCCTATGACTGCTGGTGGTGCCACTAATGCTGCCACTCATTCCTCTTCTGCTTCATCATCATCATCCTCAGCCTCTTCTTCTAGGCATGCCAATGTGGACCAAGGAAGGCAAGTGTTTGAGTTTGAGTACTTTGATAACAGGTTGTTGGAGGAGCTTCTTGATTGTGAGGACAAAAAGAAAAAGGGACCAGAAAAATGA 435 0.5264 MDEEGSRGRGKEDGRDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGPFAILNFPDEYPMTAGGATNAATHSSSASSSSSSASSSRHANVDQGRQVFEFEYFDNRLLEELLDCEDKKKKGPEK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2723 144 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Aed1g2723 144 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Aed1g2723 144 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Aed1g2723 144 PANTHER DNA-BINDING DOMAIN 9 136 IPR044808 GO:0003700|GO:0009873
Aed1g2723 144 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Aed1g2723 144 MobiDBLite consensus disorder prediction 81 111 - -
Aed1g2723 144 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Aed1g2723 144 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Aed1g2723 144 PANTHER ETHYLENE RESPONSE FACTOR 9 136 - -
Aed1g2723 144 MobiDBLite consensus disorder prediction 86 111 - -
Aed1g2723 144 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Aed1g2723 144 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2723 Aed-Chr1 22530768 22531202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2723 13 139 AP2-EREBP Transcription Factor Family AT3G23230 59.055 4.03e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed1g2723 AP2 1.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2723 - - gmx:100775830 199.904