Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2718 ATGGAACAGAAAAGATGCTGTTTTGTGATTATATGCAGAGATTTCAAGCCACACCTGCTCATGGTCTTAGTCCAGGTGGGCTATAGCATCTTATATCTGATCACTAAAGCCTCCTTCAATCATGGGATGAGCCCTTATGTGTATGTAACATATCGCCATATTGTAGCTGCGGTTTTGATGTTCCCTTTTGCATACTTTCTTGAGAGAAATGCAAGACCAAAGCTGACATTTTCTCTTTTCATGGAAATATTTGTGCTTTCTCTGTTAGGGATTAGTTTGACTATTAATATGCACTTTGCAAGCCTGAAATACACAAATCCAACCCTTGTTGTTGCAATGCTCGACACCATACCTACCCTTACCTTCATTATTGCAGTGGCACTCAGGTTTGAGGTTGTTGATCTTCGAAATTCTCGAGGGATAGCAATAGTTTTAGGAACCTTGATCTCCCTAGCTGGTGCATTGATCATGACACTCTACAAAGGACTCATTATGAGAAATTTGTGGCGTCCTCTAATCGACATTTCAGGAAAAACTGCTACTAACATCAATGAGAGTTGGCTAAAAGGTTCACTTCTTACAGTTTCAAGTTGTGTTACATGGTCTATATGGTACATTATGCAGGCAGCCACATTGAAAAGATACCCTGCCCAATTGTCACTCGCCACGTGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAGTTATAGCAGAACACAACCGTTCAGCATGGACTATAGGACTCAACATTGATTTGTGGTCCACAATATATGGTGGAATTGTCGTTGCTGGTTTGATACTGTATGTTCTACTTTGGTGCACAGAGAAAAAAGGGCCAGTTTTTGTCACAATGTTTAACCCTCTTTCTACTATATTAGTGGCATTTGTATCCTACTTTATCATTGGAGAGAAACTTTATTTGGGCAGCATCATAGGAGCATTTACAATCAGCATTGGATTGTACTTGCTACTGTGGGGCAAAAGTGAACAAGAGGTTTCGCAGTCCAGTACTACTCAAGACACAGAATGCAGAATACAGTCAATAGCTTAA 1059 0.4042 MEQKRCCFVIICRDFKPHLLMVLVQVGYSILYLITKASFNHGMSPYVYVTYRHIVAAVLMFPFAYFLERNARPKLTFSLFMEIFVLSLLGISLTINMHFASLKYTNPTLVVAMLDTIPTLTFIIAVALRFEVVDLRNSRGIAIVLGTLISLAGALIMTLYKGLIMRNLWRPLIDISGKTATNINESWLKGSLLTVSSCVTWSIWYIMQAATLKRYPAQLSLATWMCFVGAAQSAVFTVIAEHNRSAWTIGLNIDLWSTIYGGIVVAGLILYVLLWCTEKKGPVFVTMFNPLSTILVAFVSYFIIGEKLYLGSIIGAFTISIGLYLLLWGKSEQEVSQSSTTQDTECRIQSIA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2718 352 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Aed1g2718 352 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Aed1g2718 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 149 - -
Aed1g2718 352 PANTHER WAT1-RELATED PROTEIN 15 341 - -
Aed1g2718 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 331 - -
Aed1g2718 352 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2718 Aed-Chr1 22511602 22513460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2718 1 347 Nodulin-like Gene Family AT5G07050 39.617 2.08e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2718 - - gmx:100796336 597.43