Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2691 ATGTTGCAGGATGTTTTTGATCAACCACAACCACAACCACAACAGCAACTTCCCATTGATGAGATTTCAAGCCCTCTCAGTGCTCGAATTTTCGAACTATGTAACTCTGATTTTTTCCCAGAGGCATTGCCAAATTCTGAGGTTACTTCAAGCTCAAACTGTTGCTATGAGGAGAATTCCTCATATGCCACAACTGCAGATGTAGAGAACAACAAGTTGAACAATAGCAACACAGTGACCACACCAACTAGCACTACCACCACCACCAACACCAACAACACAACCAACAGTAGTAACCTCTCTATCATCTTTGACTCACAAGAAGAGATTGACAATGACATCTCTGCCTCCATAGACTTCACACTATCTCCATCTTTCAATGTTACCCCATTTTTCCCAGTGACAACATCCCAGCAAGAACAGTTTGATTTCTCTTCTGTGCAGCATCAGGTGCAACTAGCAGCATGTTCAGTTGTTGACGGGTTCTCTCAGTACCCTAATGACTCTGTTGCAGCACCTCATCTTATGGGGGCTTCATTCCCTTCTGTTTTTGAAGAGGATTGCATATCTTCTGTCCCTTCTTATATGCCTCTTAACCCCTCATCTCCTTGCACTTATCTCAGTCATGGCATGCCACCTTACATGCCTTCTGGCCCTCTTACTACTGCTTTGTCAACTGATAGTTCTGGAATGTTTGGTGGGAACATTCTTTTTGGTTCTGAACTTCAGGCACAAGAGTTGGATTACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCTATTCAGCGGGTGTTTAATCCTCCAGACCTTCAGGCACTTGGTACTGAGAGTCAGCAACTATTAGCCGGGGCTGGAGGTTCTGCTACTCTAACACCAGAAATCTCAAACTTGGAGGACTCCTCCTCCTTCAAGGTTGGAAAACTCACTGTTGAGCAAAGGAGAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCTTGCCGCAAAACTCTGGCAGATAGCCGACCTCGGGTTAGAGGAAGGTTTGCAAAGAACGATGACTTTGGAGAAACCAATAGAACTACTAGTAGCAATCCTGAAGAAGATGATGAAGAAGAAGTAGTTGTGATGAAAGATGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTACTCCATCCAGTCCTGGATTTGA 1242 0.4283 MLQDVFDQPQPQPQQQLPIDEISSPLSARIFELCNSDFFPEALPNSEVTSSSNCCYEENSSYATTADVENNKLNNSNTVTTPTSTTTTTNTNNTTNSSNLSIIFDSQEEIDNDISASIDFTLSPSFNVTPFFPVTTSQQEQFDFSSVQHQVQLAACSVVDGFSQYPNDSVAAPHLMGASFPSVFEEDCISSVPSYMPLNPSSPCTYLSHGMPPYMPSGPLTTALSTDSSGMFGGNILFGSELQAQELDYQGENGRMYCTDSIQRVFNPPDLQALGTESQQLLAGAGGSATLTPEISNLEDSSSFKVGKLTVEQRREKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNPEEDDEEEVVVMKDEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2691 413 ProSiteProfiles CCT domain profile. 314 356 IPR010402 GO:0005515
Aed1g2691 413 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 19 413 - -
Aed1g2691 413 PANTHER CCT MOTIF FAMILY PROTEIN 19 413 - -
Aed1g2691 413 MobiDBLite consensus disorder prediction 350 376 - -
Aed1g2691 413 Pfam CCT motif 314 356 IPR010402 GO:0005515
Aed1g2691 413 MobiDBLite consensus disorder prediction 66 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2691 Aed-Chr1 22306890 22314606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2691 309 363 C2C2-CO-like Transcription Factor Family AT5G24930 49.091 3.05e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed1g2691 CCT 6.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2691 - - gmx:100803778 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2691 1 22306890 22314606 Aed1g2691 1 22306890 22314606 ECH