Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2670 ATGGCGGAATCGCGGTCCCCTAAGCGCCCCAAAATCCATAGGGGGGATGATGATTATATGCCTGGAAATATTCTTGAGATTGAGCTTAGTAATTTCATGACATTTGATTACTTAAAGTGCAAACCTGGGCCTCGATTGAATCTTGTAATTGGGCCCAATGGTTCTGGTAAAAGTTCGCTTGTATGTGCTATTGCTCTTGGCCTCTGTGGAGAGCCCCAGTTGCTTGGGCGTGCCACAAGTATTGGGGCATATGTGAAGCGGGGAGAAGAATCTGGCTACATTAAGATCACCTTGAGAGGGGACCATAAAGAGGAGCACATTACCATTATGCGTAAAATTAATACTAATAACAAGTCTGAATGGTTGTTCAATGGAAATGTGGGGACCAAGAAGGATGTGTCTGAAACCATTCAAAGGTTTAACATACAAACCGAAAAGGCTGTTGGTGATCCACAGCTTCCAGAGCAACATCGGACACTAGTTGATAAAAGTCGTGCATTGAAGCATATAGAGTTGTCTCTGGAGAAAAATGAAGGAACTTTAAAACAGTTGGAGGAACAAAATGCTGAATTAGAGACGGATGTTGAACGTGTTCGTCAAAGAGATGAACTTCTTGCCAAGGCTGAAGCAATGAAAAAGAAATTGCCATGGCTGAGGTATGATATGAAGCAGGCAGAATACCGGGAAGCTAAAGAGTGTGAAAATGATGCCGCAAAGGCATTGGAGGAAGCTGCAAAGTTATTAAATGATCTTAAAGAACCCATTATGAAACAAAAAGAAGAGAAGGCTGCATTATATGCAAAATGCAAAAAGGTTCGCAGCCACGTAACAGAGAATGCAAAGAAGCGAATCGAACTTATGGAGGAGGAAAACAAATTGGACGTGGAATTAAATGGAAAATACAAAGAAATGGAAGATTTGAGGAGGCAGGAAGAAACTCGACAACAAAAACTTGTAAAAGCTCGGGAGGAACTTGCTATCGCCGAGTGTGAACTTGAGAATTTACCCTCTTATGTACCTCCTAAGGATGAGCTTCAAAGACTAAAAACTGAAATCGCGGATTTGGATTATGCTGCTAAAGAAAGGAGGAAGAATAAGTCAGAAGCAGAAAATGAAATAATCCATAAGAAGGCATCCATGAAGCGTATTAAAGAAAGGTTGATGGAAATGAATAATAGAAGTACAAAGTGTTTGCATGCATTGCAAAAATCAGGGGCTGAAAAAATTTTCGAAGCTTATAAATGGGTCCAAGAACATCGGCATGAATTCAACAAGGAGGTTTATGGCCCAGTTTTAGTAGAGGTGAATGTCTCAAATAAGGATCATGCTGCATATCTAGAGGGTCAAGTGGCATATTACACTTGGAAGTCATTCATAACACAAGATGATGGTGATCGAGATCTTTTGGTGAAACACCTGCAGTTCTTTGATGTATCGATTTTAAATTATACTGGTGGTGATGGTTCCCAAAGAGAGCCTTTTGAGATTTCTGAAGATAAGCGTGCTCTTGGCATCTACTCCCGGCTGGATCAAATTTTTGATGCTCCTATTGCTGTGAAGGAGGTTTTGATTAGCCAGTTCAGTCTAGATTATTCATATATTGGATCCAAAGAAACTGATCAGAATGCTGACAAGGTCTCGAAATTGGGAATTATGGATTTATGGACACCTGAAAATCACTACCGTTGGTCCAAGTCTAGATATGCAAATTATGTCTCTGCAATTGTTAAACCAGTGGAGCACTCACAACTTTTATTGAATAATTTGAATTTTGGTGAAATTGAGAAGCTGAGTTCCCAGCAAATGGAGCTTGAAGAAGTCGTTGCTAATTTGGAGGAAAGTGTTAAAAGGTTTCAAGATGAAGAAAGAAGCTTTGTGAATCAAGCTGCTAATCTTCGCAAACAGTGGGAAGACACTCGTATTACTGCACAGAATGAGCAGAAAAAACGTCAAGCAATGATTAGCCATATTGATCAAAAGAAAAAGTTATTAAAATTGATGGAGGAACGGGATGATCTCGATACTGAGATAGCCAAGCTTGTTGATCAGGCTACAAAATATAACATTAAGCGTTTCCATAATGCAATGGAAATTAAGGATCTTCTTGTTGAGTCTGTTAATTACAGGCGGATTTATATTGAACAACATATGGCTTTCATTGAACTTGATGCAAAGATTGCTGAAATGGAGGCCAGTCTGAAACAGCATGACAATTTTGCCCTGCAAGCATCATTGCACTTCGATAACTGTAAGAAAGAATCTGAGAATTGTAGACAGAATCTTACAGATTCCTTGAAGTATGCTAAATCAATTGCCCGGCTTACACCTGAGCTAAAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAACTGGAAGCAGCTATCCAAGATACCACATCTGAAGCCAATTCAATCCTCTTTGTCAATCATAACATATTGGAACAATATGAAGATCGTCAACGACAAATAGAAGATCTTGCCACAAAACTGGAAGCAAACAAGAAGGAATCTACACGGTGTTTGGCTGAAATAAATAACATTAAGGGGAAATGGCTTCCAACATTGAGAAACCTTGTGGCAAAGATAAATGAAACTTTCACTTTTAATTTCCAAGAGATGGCTGTTGCTGGAGAAGTTTCACTAGAAAATGGAGAGCTTCAAGTTTTGAGCGCACATCATCAATCAGGCGGAGAGAGATCAGTCTCAACTATTGTTTATCTTGTTTCCCTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGAATGGACCCAATAAATGAAAGGAATATGTTCCAGCAATTAGTGAGAGCAGCAAGCAAGCCAAATACACCCCAGTGTTTCTTGCTTACTCCGAAATTGTTACCAGATCTGCAATACAGTGAGGCATGCAGTATATTGAATGTGATGAATGGCCCTTGGATTGAGCAACCCTCAAAGGAATCCACGTTGACCCATATTGAGAGCATGGTTGGTGAAAGAGAAACCCTAGAGGAGCTTGTAGAAAAGGAGGGTTCTGATTTGTGCATAGAAGACGTTGTTTGCACTCGTGAGGGTGATGCTGAGCTGAATGGTGATGTGAATTTTGATGGATCAAAAGAGGAGGGTAAAGGTGTGAATCCTTCAGGTGGTGAAGCTGCTGAGGGTTCTCAAGTTGTGAGATCCTTAGAAGGGAAGAGTGAGAATGAGATTGCTGAGTTAGATGGAAATGATGCCACCTTGAAAGTATTGGATGAGCAGAAGAAAGTTGATGACAGGGAGGTGACTAAATTAGTGGAGAAAGAAGCAATTAGTGATGTTATTCAGGTTGAAAGCACTGAAGAGCATGTTGGGGCTCTTGGTGAGTGTTCTCAAGTTGTGGGGCCCTTAGAAAAGAGTGAGAATGGGACTGCTGAGTTGGATGGAAATGATGCTACCTTGAAAACATTGGATGAGCAGAAGAACATTGATATTAGGCAGAGCATTGAATGGAAAGCTGCTGGCATTCCTGAGGAGGTTGGTTCACAAGAAGAGCAGGAAATTGAAGGTGAAAATTTTGATGATGCTAAACGGCGAAAACCAGCACATAGAAGAGTTACAAAGCATGTGTCGAACAAGAGTTCAGGAAACATTCTTCATGCAAGTTATCTGCTGCCAAAGGAAAAAGGTGAGTTTTCTGTGTATGATATGGTTTGGGGTAAGGTGAAAAGCCATCCATGGTGGCCAGGGCAGATATTTGATCTCTCGGATTCGTCTGTGGAGGCAAAGAAGCATTTAAAAAAGGACCGCTATTTGGTTGCGTATTTTGGGGATAGAACATTTGCTTGGAATGAATCATCTCAGTTAAAGCCCTTTAGAACTCATTTCTCTAATATTGTAAAGCAGAGCAACTCAGATGCATTTCAAAATGCTGTAGATTGTGCTTTGGATGAAGGTTACTCTTGCTTGCCTGAGTTACAATATTGTGGAGTTGTGGATAATGACACTGATGCCTTAATTAAGGGTACTGACAAAAGTTTGAGTGAAGTTAATAAGCATGCAAATCATGCAAGTAAAAAAGATGGTCAAACTGGTGCTGGAAGTGTGAAGACATATGGCTCCAGTCGCAAACGCAAGCATAATTTGAAAGATGATTTATATCCAGAAAAGAAGAAAAGAATCTTGTCAGAATCAGCAGGTGGGACTCCAGATTCTTCACATGGTGATTATCGGTCAGGTGATGCCAATGATAATCTGATTTCTCCTGCCTCTTCCAAGAAAAGGAAGACTATTGATCACCGTGCTGGTGTTTCAGGGAAGAAAGATAGGAGAAAACCAATTTCCCTTGCCAAAGTTTCAAATACCATAAAACAATCATTTAAAATTGGTGAACGTCTTCTAAGGGTTGCTAATCAACTTTCTGGACCACCCTCTATGTTGAAGTGTTCTGGAGATAGGTCTCAAATAGAAGATGGAAGTGTTGATGGTTTTTCAGGAAACGGATCTGATGTCTTCTCCCCTAATCATGAGAAGACTCAGAAGTCAAGCTTGACTGTTCCAACTGAATATTCATCTCTAGATGATTTGCTACATTTACTTCAGTGGGTAGCACACGAACCCCTAGGAGATTATAGTTCCTTGAATGTTATAGTGAGCTTCTTCTCTGATTTCAGGAATTCAATAATTGTGGCCAATGATTCTGAAAAAGAAATTTCGCCTACAAAGAAAGTTGGTGCTAAAAGGAATAAACAACCTGTGGGTGGATCGCCTGAAACATTTGAATTTGATGACACGGGCATCCAGAGTGGTTCTGAAACAAAGAGTTCATGGAGAAGCAGCAGAAGAGACTATCAACATACCCCTGCTGAGCCAGAAAAACCTATTATAGTTTATACTCGTAGGTCCCATTCCAGGAAACAATGTTCTGACAGCAATCATGTTGTGGTTCCTGAAAAGCCTTCTGGTTGTGCAGATGAGAGTTCCCCCGCTGAACTTGTTTTGAACTTTGCAGAGCTGGATTCTGTTCCCTCAGAAATGAGCCTAAATAAGATTTTTAGGCGATTTGGACCTCTAAATGAATCTGAAACAGAAGTTGATAGAGGGAGCAGCCAGGCTAGAGTGGTTTTTAAGAAGTGTGCTGATGCGAGGGTTGCTTTCAGTAGTGCTAAAAAGTTCAACATATTTGGATCAGTTCTTGTAAATTACAAGCTTAACCATACTCCAAGATTCGAGAATATTTAA 5217 0.4023 MAESRSPKRPKIHRGDDDYMPGNILEIELSNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKEEHITIMRKINTNNKSEWLFNGNVGTKKDVSETIQRFNIQTEKAVGDPQLPEQHRTLVDKSRALKHIELSLEKNEGTLKQLEEQNAELETDVERVRQRDELLAKAEAMKKKLPWLRYDMKQAEYREAKECENDAAKALEEAAKLLNDLKEPIMKQKEEKAALYAKCKKVRSHVTENAKKRIELMEEENKLDVELNGKYKEMEDLRRQEETRQQKLVKAREELAIAECELENLPSYVPPKDELQRLKTEIADLDYAAKERRKNKSEAENEIIHKKASMKRIKERLMEMNNRSTKCLHALQKSGAEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSNKDHAAYLEGQVAYYTWKSFITQDDGDRDLLVKHLQFFDVSILNYTGGDGSQREPFEISEDKRALGIYSRLDQIFDAPIAVKEVLISQFSLDYSYIGSKETDQNADKVSKLGIMDLWTPENHYRWSKSRYANYVSAIVKPVEHSQLLLNNLNFGEIEKLSSQQMELEEVVANLEESVKRFQDEERSFVNQAANLRKQWEDTRITAQNEQKKRQAMISHIDQKKKLLKLMEERDDLDTEIAKLVDQATKYNIKRFHNAMEIKDLLVESVNYRRIYIEQHMAFIELDAKIAEMEASLKQHDNFALQASLHFDNCKKESENCRQNLTDSLKYAKSIARLTPELKKEFLEMPTTIEELEAAIQDTTSEANSILFVNHNILEQYEDRQRQIEDLATKLEANKKESTRCLAEINNIKGKWLPTLRNLVAKINETFTFNFQEMAVAGEVSLENGELQVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERNMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKESTLTHIESMVGERETLEELVEKEGSDLCIEDVVCTREGDAELNGDVNFDGSKEEGKGVNPSGGEAAEGSQVVRSLEGKSENEIAELDGNDATLKVLDEQKKVDDREVTKLVEKEAISDVIQVESTEEHVGALGECSQVVGPLEKSENGTAELDGNDATLKTLDEQKNIDIRQSIEWKAAGIPEEVGSQEEQEIEGENFDDAKRRKPAHRRVTKHVSNKSSGNILHASYLLPKEKGEFSVYDMVWGKVKSHPWWPGQIFDLSDSSVEAKKHLKKDRYLVAYFGDRTFAWNESSQLKPFRTHFSNIVKQSNSDAFQNAVDCALDEGYSCLPELQYCGVVDNDTDALIKGTDKSLSEVNKHANHASKKDGQTGAGSVKTYGSSRKRKHNLKDDLYPEKKKRILSESAGGTPDSSHGDYRSGDANDNLISPASSKKRKTIDHRAGVSGKKDRRKPISLAKVSNTIKQSFKIGERLLRVANQLSGPPSMLKCSGDRSQIEDGSVDGFSGNGSDVFSPNHEKTQKSSLTVPTEYSSLDDLLHLLQWVAHEPLGDYSSLNVIVSFFSDFRNSIIVANDSEKEISPTKKVGAKRNKQPVGGSPETFEFDDTGIQSGSETKSSWRSSRRDYQHTPAEPEKPIIVYTRRSHSRKQCSDSNHVVVPEKPSGCADESSPAELVLNFAELDSVPSEMSLNKIFRRFGPLNESETEVDRGSSQARVVFKKCADARVAFSSAKKFNIFGSVLVNYKLNHTPRFENI 1738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2670 1738 MobiDBLite consensus disorder prediction 1418 1438 - -
Aed1g2670 1738 Gene3D - 1215 1318 - -
Aed1g2670 1738 MobiDBLite consensus disorder prediction 1342 1438 - -
Aed1g2670 1738 Pfam PWWP domain 1228 1309 IPR000313 -
Aed1g2670 1738 Pfam RecF/RecN/SMC N terminal domain 24 947 IPR003395 -
Aed1g2670 1738 Gene3D - 23 214 IPR027417 -
Aed1g2670 1738 SUPERFAMILY Tudor/PWWP/MBT 1222 1310 - -
Aed1g2670 1738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 263 IPR027417 -
Aed1g2670 1738 Gene3D - 733 961 IPR027417 -
Aed1g2670 1738 Coils Coil 663 683 - -
Aed1g2670 1738 MobiDBLite consensus disorder prediction 1370 1389 - -
Aed1g2670 1738 Coils Coil 167 201 - -
Aed1g2670 1738 MobiDBLite consensus disorder prediction 1490 1509 - -
Aed1g2670 1738 Coils Coil 594 635 - -
Aed1g2670 1738 Coils Coil 814 837 - -
Aed1g2670 1738 SMART PWWP_4 1224 1285 IPR000313 -
Aed1g2670 1738 Coils Coil 366 386 - -
Aed1g2670 1738 MobiDBLite consensus disorder prediction 1566 1616 - -
Aed1g2670 1738 ProSiteProfiles PWWP domain profile. 1226 1287 IPR000313 -
Aed1g2670 1738 CDD ABC_SMC5_euk 883 981 - -
Aed1g2670 1738 CDD PWWP 1224 1310 - -
Aed1g2670 1738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 731 957 IPR027417 -
Aed1g2670 1738 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 990 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Aed1g2670 1738 MobiDBLite consensus disorder prediction 1031 1057 - -
Aed1g2670 1738 Coils Coil 223 250 - -
Aed1g2670 1738 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2670 Aed-Chr1 22154752 22178057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2670 1 990 Structural Maintenance of Chromosomes family AT5G15920 57.046 0.0 1156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2670 K22803 - gmx:100778678 1737.24