Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2594 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAAATTCAGGCCAATTCCTCGTCTTCCAATGGTGGTGGCAATGTCCAGAGATCCAAAAGCTTTGCTTTTAGGGCTCCCCAGGAGAATTACACCATCCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACTGGAACTGTGTACGCATTGAAGATCATGGACAAGAAATTTATTACCAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATTGTGCTAGATCAATTGGATCATCCAGGCATTGTGCGGTTATATTTCACATTTCAAGACTCATTTTCTCTATACATGGCACTTGAATCCTGTGAAGGCGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTATCAGAGGATGAGGCACGATTCTATGCAGCTGAAGTTGTCGATGCTCTTGAATACATACATAGTTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTATTACTTACAGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATAACCGTCCTTCCAAATGCAGCATCAGATGACAAAGCCTGCACTTTTGTGGGAACTGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGACCTATGGGCACTTGGCTGCACGTTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTTCAAAGAATTGTAGCAAGAGAACTTCGATTTCCAGATTACTTTTCTGAGGAAGCAAGAGACCTTATTGACCGCCTGTTGGATTTGGACCCCAGCAGGAGACCAGGGGCTGGACCTGATGGTTATGCTATTTTAAAAAGGCACCCATTTTTCAAGGGGGTAGACTGGGATCACTTGAGGACACTAATTCCTCCAAAACTTTCTCCAGAAGCTGGGGGGACTCAGTCGCCTGCGGCTGATGATGTTCATGACTCATCATGGAGTCCTTCTCACGTTGGGGATGGTTTGGCAGCTTCAGGTAGACAACCTGATGGTGCTACATCATCTTCTGAGGGGACTGGTCACATAACTAGGCTAGCTTCAATTGATTCCTTCGATTCAAAATGGCAACAATTTTTGGAGCCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTCACCAACAAGCCAAAGTTGATCTATGTGGATCCATCAAAGCTAATTGTGAAAGGAAATATAATATGGTCTGATAATCCAAATGATTTAAACATCCAAGTGGCTAGTCCATCAAATTTCAAAATTTGCACACCTAAAAAGGTAATGTCATTTGAGGATGCAAAGCAAAGAGCATGGCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA 1482 0.4231 MLEMEKDFDSKLKIQANSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIVARELRFPDYFSEEARDLIDRLLDLDPSRRPGAGPDGYAILKRHPFFKGVDWDHLRTLIPPKLSPEAGGTQSPAADDVHDSSWSPSHVGDGLAASGRQPDGATSSSEGTGHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVASPSNFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2594 493 SUPERFAMILY Protein kinase-like (PK-like) 44 336 IPR011009 -
Aed1g2594 493 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2594 493 Coils Coil 473 493 - -
Aed1g2594 493 MobiDBLite consensus disorder prediction 328 376 - -
Aed1g2594 493 Pfam PH domain 390 492 IPR033931 -
Aed1g2594 493 Gene3D Transferase(Phosphotransferase) domain 1 131 333 - -
Aed1g2594 493 SUPERFAMILY PH domain-like 308 492 - -
Aed1g2594 493 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2594 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Aed1g2594 493 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Aed1g2594 493 Pfam Protein kinase domain 49 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2594 493 Gene3D - 369 493 IPR011993 -
Aed1g2594 493 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Aed1g2594 493 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 489 - -
Aed1g2594 493 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 21 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2594 Aed-Chr1 21585672 21591928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2594 1 493 AGC Kinase Gene Family AT3G10540 82.186 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Aed1g2594 Pkinase 7.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2594 K06276 - gmx:100788780 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2594 1 21585672 21591928 Aed1g2594 1 21585672 21591928 ECH