Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2586 ATGGATATACCGAAGAACCGCGCCACTCGAACAACGTCTCTCAGAGACGCCTCCGACTCCTCTAAGTTGGAAGGCACCGGCAGCTGGGACGCTCTCGAATGGACCAAGATTGAGCGAATTCCACGCTTCGTCTCGCACGCGAATCTTGATTTCTTGCTCGAGGCGGAGCAAGTTGTAGCGGAAGGACATGGTGTTGTTCTTGTTAATATAGATGATGCAGGCACGCTGATGGTAACGAATTTCCGTCTTATTTTTCTGAGTGAGGGAACTAGAAAAGTTATTGCCCTTGGAACTATACCACTAGCAACCATTGAGAAGTTTAACAAGATAGCTGTAAAGGTTCAGTCAAATACTCGTCATGCAGACAAGACACCAGCACAGAGACTGCTCCAGAGACGTGTGGTATTTGATGCGCTACTGAGATGTACAAAGTCAACAGGATTATGGGATCTTTATGCTTTTGCATCAGAACCTTCTAGGTTTAAGAACACTACTCCACTTGTGCGTTTACTGGATGAATATTTTCGACTTCTTTGCCTAGGTTCTTATCGTGCATCAATCAAAATAATTGAAAATGGGTCCTTCACCTTGTCAAATGACCTATGGAGAATAAGTAGCGTGAATTCCAATTATACAATGTGCCAGACTTATCCATTTGCTTTGGTTGTTCCAAAGATCATTAGTGATGATGAAGTGCTCCAGGCTTCCAGCTTCCGTGCAAGAAGTCGACTACCTGTAGTTTCATGGTGCCATCCTTTGACTGGAGCAGTTGTTGCACGATCTTCTCAACCCTTAGTTGGTCTTATGATGAACATGAGGAGAAAGTTATATATTGTTGATGCACGGCCAAGAAAAAATGCATTGGCTAATGGGGCTATGGGAGGTGGTTCGGAATCATCATCAAACTATTTTCAATCCGAGGTAGTCTTTTTGGGGATAGACAACATCCATGCAATGAGAGAGAGCTTTGTTCGGCTTCGAGAATACATGGACACTCATGGCAGAACGTCATCGGATGGAATGTCCTCTTTTCTGAGACAAGGTGGGTCAACGTGGGGTGGTGGCAATCTAAGTAGTATGTCTGCTTCAGTATCAACCCTTGGGGACAGTGGATGGTTACTGCATGTTCAGAATGTGTTGGCTGGAGCAGCTTGGATTGCTGCTCGTGTTGCAATGGAAAACGCCTCTGTTCTTGTGCATTGCAGTGATGGATGGGATAGAACAAGCCAGTTGGTTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCACAGGGTTTCAGGCGCTCATTGAAAAAGACTGGCTTGCTTTTGGTCATCCATTTTCTGATCGGGTGGGAATGCCATCTGTCTCTGGAACTGGCAATGTGCCTTTCGAGTTATCTAGGCAGTCTTCAACTGGTAATTTTTCACCATCACCCATGCGCCAGTCATCAGGCTCGTCGCAACCTCCAACTTCATCTCACTCAAATAACTCCAACAACTATTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAATTATTGCGGATGTATCCTTTTGCTTTTGAGTTCTCTGGGGCTTTCCTAGTGGACTTCGTAGATTGCATGCTTTCTTGTCGTTTTGGAAACTTCTTATGTAACAGTGAGAAGGAGAGGCAGCAATGCAATGTTTTTGAGGCATGTGGATGTCTGTGGGCATACTTGGGTGATATGCGGACATCAGAAGGAGGTTCCCATGTGCATTACAATCCCTTTTATGATCCACTGAAGCATAATTGTCCTCTCCTGCCCCCAGCAGCAGCATTAGCCCCTACTTTGTGGCCCCAATTCCACCTTCGTTGGGCATGCCCAGAAGAAGCACAATCTGGGGAGATTGAAGCACAATGCAGGAAGATAGTTATGAAATACGCCGAGATGCAGAAGGCTAAAGAAATGGCAGAAAGAAAAGGTAAAGAAGTTACAAATTCCATGGAGTCGTTGAATGCAGAATTACGACGTGAGAAGCAGCTAAACAGCTCAGCTATGAACATGGCCAAGAGTATGAGCAAAGAAAATATGGCCATAAAGCGTGCAATTCAGTCAATGGGTTGCAAGGTTCATTTCTCTGGTAGTAGTGGTGAATGCACTGTCGACATTGAAAGCAACCCAGACATTTTGTGGTGTTCCTCTAGGAGAGAATCAAGTAGTAATGTGCACGATGACAAAAAGGATATGTCTGTTTCAGTACTGATTACAGCAGATGATGATGATGCTGATGGAAACAATGCAATTGGCCGTGTATGTGAAACTCTCTGCCCGTTTCACTCTCGAGATGGAGGCTGCAGGTGGCCAAATGGTGGTTGTGCTCAACTAGGAAGCCAGTACGTTGGCCTGAGGGCAAATTTTGATGCATTTGACCAACTATCAATTGATGATAGTTATTTCAAGTCTGAGTGA 2430 0.4465 MDIPKNRATRTTSLRDASDSSKLEGTGSWDALEWTKIERIPRFVSHANLDFLLEAEQVVAEGHGVVLVNIDDAGTLMVTNFRLIFLSEGTRKVIALGTIPLATIEKFNKIAVKVQSNTRHADKTPAQRLLQRRVVFDALLRCTKSTGLWDLYAFASEPSRFKNTTPLVRLLDEYFRLLCLGSYRASIKIIENGSFTLSNDLWRISSVNSNYTMCQTYPFALVVPKIISDDEVLQASSFRARSRLPVVSWCHPLTGAVVARSSQPLVGLMMNMRRKLYIVDARPRKNALANGAMGGGSESSSNYFQSEVVFLGIDNIHAMRESFVRLREYMDTHGRTSSDGMSSFLRQGGSTWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMENASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALIEKDWLAFGHPFSDRVGMPSVSGTGNVPFELSRQSSTGNFSPSPMRQSSGSSQPPTSSHSNNSNNYSPIFLQWVDCVSQLLRMYPFAFEFSGAFLVDFVDCMLSCRFGNFLCNSEKERQQCNVFEACGCLWAYLGDMRTSEGGSHVHYNPFYDPLKHNCPLLPPAAALAPTLWPQFHLRWACPEEAQSGEIEAQCRKIVMKYAEMQKAKEMAERKGKEVTNSMESLNAELRREKQLNSSAMNMAKSMSKENMAIKRAIQSMGCKVHFSGSSGECTVDIESNPDILWCSSRRESSSNVHDDKKDMSVSVLITADDDDADGNNAIGRVCETLCPFHSRDGGCRWPNGGCAQLGSQYVGLRANFDAFDQLSIDDSYFKSE 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2586 809 Pfam Myotubularin-like phosphatase domain 151 551 IPR010569 -
Aed1g2586 809 SMART gram2001c 41 111 IPR004182 -
Aed1g2586 809 SUPERFAMILY PH domain-like 52 155 - -
Aed1g2586 809 MobiDBLite consensus disorder prediction 465 493 - -
Aed1g2586 809 ProSiteProfiles Myotubularin phosphatase domain. 182 609 IPR010569 -
Aed1g2586 809 PANTHER MYOTUBULARIN-RELATED 19 808 IPR030564 -
Aed1g2586 809 Gene3D - 65 130 IPR011993 -
Aed1g2586 809 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 191 613 IPR029021 -
Aed1g2586 809 MobiDBLite consensus disorder prediction 1 22 - -
Aed1g2586 809 ProSitePatterns Tyrosine specific protein phosphatases active site. 399 409 IPR016130 GO:0016311|GO:0016791
Aed1g2586 809 Coils Coil 641 675 - -
Aed1g2586 809 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 808 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2586 1 809 Protein tyrosine phosphatase (PTP) family AT3G10550 63.892 0.0 1076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2586 K18081 - gmx:100781842 1444.48