Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2585 ATGGCCACCGAAGACTACCCTATCCTCGACTCTCCCTCCCACGCGCAGCCTCACCTCCACGCTCCTACGCGCCACCATTTCCCTTCCTCCTCCTCCTCCAGTCCCACCGCTCTCTCCGCCGCCGACTCTGCCACCGCCGACTACTACCCCCACGCCTCCAACGACGACTCCGCCAAATCCAACTCCAAGCACGCCTCCGCCGCCAGCAGCCCCTACTACTGCAATAAGAAGCTCAAATCCTCTGCCGATCCGGATCCATCGACCAACACGGAGTTCCACGGCGGTGGCGGAAGCGGAAGCGATTACCGGAAGGATCGAGAAGAATGGAGCGACACGTCGATCGCGTGTCTGTTGGAGGCGTACACGGAGAAGTTCAACCAGCTGAACCGCGGCAACCTCCGCGGCCGCGACTGGGAGGAGGTGGCGGAGGCGGTGGGGGAACGGTGTGGCGGAGAGGGGAAGCATCACAAGAGTGTGGAACAGTGTAAGAATAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGCTTCAGAGAATTGGGAGTGGTGGCATTGCCACTAGTCACTGGCATTGGTTTAAGAAGATTGAAGCTATTGTTGGCAACTCTCTATCTGTAAAAACGGTTTCTGATGATGATAAGGCTGGCACTAGTGGTGGTGCTATTTCTTCTTCTATGGCTAGACAAACCAAAAACAGGGAAGTGGCAACAGCTAGCCGCCTTGGGGTGGAGGTGGCCATCATTGTTGGTGGTCGGAACTTCTTTTGTGGAGATGCATGGGTGTCTGCTACTGGATTGGACAGACCTTTGGCATACCAAATAGGTATGATGGCAACAGTTATGAATTCTATTTTGCTTCAATCTGCTTTGGAGAAGCTGGGTGTTCAGGCACGCATTCAGAGTACATTCTCGATGCCAGAGGTTGCTGAGCCATATAGCAGGCAACGAGCTATTAGACATCTTGAGAAAGGAAGGGTTGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCACTATTTACCACCGATACAGCTGCCGCTCTTAGAGCTTCTGAGCTGAATACTGATGTGGTTCTGAAAGGCACTAATGTGAATGGTGTCTTTGACTGTCATCCCTGTAACGATAATGCAACACTTGATCACATTTCCTTTAGGGAAGTTGTTTCTAGGGGCATCACCTCCATGGATATGATGGCACTGGCATACTGTGAAGAGAATGGAATACCCGTTGTAGTTTTCAACATGCTTGAACCAGGGAATGTTTCAAGAGCATTATGTGGAGATCAAGTTGGCACTTTGATCGATCAAACCGGTAGAGTAGAGCAGCAGCTTCCTAATTAA 1344 0.5112 MATEDYPILDSPSHAQPHLHAPTRHHFPSSSSSSPTALSAADSATADYYPHASNDDSAKSNSKHASAASSPYYCNKKLKSSADPDPSTNTEFHGGGGSGSDYRKDREEWSDTSIACLLEAYTEKFNQLNRGNLRGRDWEEVAEAVGERCGGEGKHHKSVEQCKNKIDNLKKRYKVELQRIGSGGIATSHWHWFKKIEAIVGNSLSVKTVSDDDKAGTSGGAISSSMARQTKNREVATASRLGVEVAIIVGGRNFFCGDAWVSATGLDRPLAYQIGMMATVMNSILLQSALEKLGVQARIQSTFSMPEVAEPYSRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNTDVVLKGTNVNGVFDCHPCNDNATLDHISFREVVSRGITSMDMMALAYCEENGIPVVVFNMLEPGNVSRALCGDQVGTLIDQTGRVEQQLPN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2585 447 Pfam Myb/SANT-like DNA-binding domain 106 199 IPR044822 -
Aed1g2585 447 Gene3D - 215 443 IPR036393 -
Aed1g2585 447 CDD AAK_UMPK-PyrH-Ec 215 436 IPR015963 GO:0005737|GO:0006221|GO:0033862
Aed1g2585 447 PANTHER KINASE, PUTATIVE-RELATED 1 231 - -
Aed1g2585 447 SMART sant 105 172 IPR001005 -
Aed1g2585 447 Gene3D - 109 175 - -
Aed1g2585 447 Pfam Amino acid kinase family 233 415 IPR001048 -
Aed1g2585 447 PANTHER KINASE, PUTATIVE-RELATED 233 441 - -
Aed1g2585 447 Coils Coil 159 179 - -
Aed1g2585 447 SUPERFAMILY Carbamate kinase-like 226 435 IPR036393 -
Aed1g2585 447 PANTHER URIDYLATE KINASE 1 231 - -
Aed1g2585 447 MobiDBLite consensus disorder prediction 1 105 - -
Aed1g2585 447 PANTHER URIDYLATE KINASE 233 441 - -
Aed1g2585 447 MobiDBLite consensus disorder prediction 25 41 - -
Aed1g2585 447 MobiDBLite consensus disorder prediction 54 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2585 Aed-Chr1 21476429 21479738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2585 94 219 Trihelix Transcription Factor Family AT3G14180 40.157 6.47e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed1g2585 AA_kinase 5.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2585 - - gmx:100791426 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2585 1 21476429 21479738 Aed1g2585 1 21476429 21479738 ECH