Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2577 ATGAGTGATCCATATGGGCTACCGGAGGATCTCCGGCGGCTTATACCAGGAGCCAGAACCCATTTGAACACTTCAAACACACACCTACTTGAGTCACCACTTTGTGTTCACCATCATGGTCTCACTAGTGCTAGTGCTACTCCACTCAACAACACAACCTATGACCCCAACATGGTTGGGGACGTTTTCTACCCTCGTACTGGTTTCACTCATCATCACTTTTCTCATCATCATCATGATTACTCTTCTTCCTCTGGCGTAAACCCTGCTACTGCTGGTGGTGGTGGTGGTGCTGCTACTGTCTCAGATCATGCATTCTGCAGCATGGAGAGTGCAGAGAAAGGGTGGTTTGGGTTTGATTCCGGGAACAACAGGATAATGGGTGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACAAAAGAAGGTAAAGCTAGTAGACAAGATGGGAAACACTACAGGTTTTTCAGGCAGCTTGAAGCAATATGTGGAGATCAAGCAAACACTATCAATAATGCTCATGCCTCAACTTCAGACAAAACCCATCATCGTGCAGCTGGTGGAAACACTGCTACTACTAATGTTCAAACACAAACCTTCACAATGAATAACCAAGACCACAATGGTACTGATTCCAATAATAATAACCCCAAATGCTCTGAGAGCTTGAGTATCTCAAATTCATCTGAATTCGAGACATCCTCATCAGAGAACAACAACGATGAGGACCTTTCAGCCATTGCATTCATGATGAAGCAGCAGTCAAGGGATCAGAAGCAGAAAGGGTTGGAGTTGGATCATCATAGGAGGGTGAGAAAAAGCTGGAGAGCAAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATCATAGAGACTCAAGATTCTTGGATGGAGAGAATGTTGAGTGTTGTTGAGCAAAGGGAACAAGAGATGGCATCTAGGGAGGAAGAGAGGAAGAGAAAAGAGTCAATGTGGTTTGACCAACAGGTTCATGAACTTTGGGCTAAAGAGAAAGCATGGGTTGAGGCAAGAGATGCTGCATTGATAGAGGTTGTGAAGAAACACATTGGGATAGGATCACTTGAAGCAGCATTGCCATTGGTTGAAGAAGAACAACCACCAAATAAGAACAACAACATTGATGTTGATCATAATAATAGAAGTGGTAGTAGTAGTAGGTGGACAGAAATGGAGATTTCAAACTTGATACAGCTGAGGACTAGTTTTGAGCAAAGATTCAGAGAAAACATTAATAATGGGTACTTGGAGAATGGAGTAGTTTGGGATGAAATAGCAGGAAAACTGGGTTGTTTGGGGTTTGATAGGAGTGGAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGGACAGTGGATGATGAGTGTAGTGATGGTGCAAAAAGAAGGCCTTGGTATTTGGGACTTAAGCTGACGGATGATGATGATGATCTTTGA 1512 0.4306 MSDPYGLPEDLRRLIPGARTHLNTSNTHLLESPLCVHHHGLTSASATPLNNTTYDPNMVGDVFYPRTGFTHHHFSHHHHDYSSSSGVNPATAGGGGGAATVSDHAFCSMESAEKGWFGFDSGNNRIMGEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGDQANTINNAHASTSDKTHHRAAGGNTATTNVQTQTFTMNNQDHNGTDSNNNNPKCSESLSISNSSEFETSSSENNNDEDLSAIAFMMKQQSRDQKQKGLELDHHRRVRKSWRAKVEEIVDSHMRKIIETQDSWMERMLSVVEQREQEMASREEERKRKESMWFDQQVHELWAKEKAWVEARDAALIEVVKKHIGIGSLEAALPLVEEEQPPNKNNNIDVDHNNRSGSSSRWTEMEISNLIQLRTSFEQRFRENINNGYLENGVVWDEIAGKLGCLGFDRSGSECKQIWDEISISLRRTVDDECSDGAKRRPWYLGLKLTDDDDDL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2577 503 Pfam Myb/SANT-like DNA-binding domain 129 176 IPR044822 -
Aed1g2577 503 Pfam Myb/SANT-like DNA-binding domain 407 478 IPR044822 -
Aed1g2577 503 Coils Coil 319 339 - -
Aed1g2577 503 CDD GT1 407 476 - -
Aed1g2577 503 MobiDBLite consensus disorder prediction 215 254 - -
Aed1g2577 503 MobiDBLite consensus disorder prediction 387 408 - -
Aed1g2577 503 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 125 477 - -
Aed1g2577 503 MobiDBLite consensus disorder prediction 189 208 - -
Aed1g2577 503 PANTHER - 125 477 - -
Aed1g2577 503 ProSiteProfiles Myb-like domain profile. 401 470 IPR001005 -
Aed1g2577 503 Gene3D - 409 475 - -
Aed1g2577 503 Gene3D - 124 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2577 Aed-Chr1 21403558 21406350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2577 125 475 Trihelix Transcription Factor Family AT5G03680 38.630 7.81e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed1g2577 Myb_DNA-bind_4 8.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2577 - - gmx:100784522 686.026