Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2568 ATGTCGATAATACAATTTGTTGACCTGAATGTCCAAGCTACAAATGTGACTATTGTATACCGGTTCTATGCATCTGAAGTTGTTGTTGCGTTGGAGTACCTACACATGATGGGGATAATATACCGTGATTTGAAGCCTGAAAACGTGCTCATAAGATCAGACGGTCATATAATGCTCACAGACTTTGACCTCTCATTAAAAGGTGATGATACGACATCAACGGCTCAGATTGTGTTTGATCAAGATCCACCGACCAACACCTATTCTAATGAACATTCCAAGAACCAATGCGCCCCCGCCATGTCATCATGCATGTTGCCCAATTGCATCGTGCCATCTGTCCCATGCTTCCACCCAAAACGCGGTCGTAGCAAGCGATCCTCTCGTTGTGGGTCCCTCGAGATCATAGCAGAGCCAATAGAAATTCGATCAACCTCGTTCGTTGGAACCCACGAGTACTTGGCACCAGAAGTAATTTCAGGAGAAGGTCACGGTAACGCCGTTGATTGGTGGACATTGGGTGTGTTTCTTTTTGAAATGTTCTATGGGATCACACCCTTCAAAGGGCTTGAGCATGAGCTAACCCTAGCCAACATAGTGGCTCGAGCCCTTGAATTCCCTAAAGAGCCCATGATCCCTGGATCAGCGAGGGATTTGATCTCACAACTTTTGGTGAAGGATTCAACAATGAGACTAGGGTCTAGAATGGGTGCCGTAGCAATTAAGCACCACCCATTTTTCAATGGGGTTAATTGGGCATTGTTGAGGTGTGCTACCCCTCCATACATCCCTTCATCAGAAAAGTGCAAGGAGTTGGTTCGAGTCTATGATTGCACAAACAATGCTATAGATTTCTATTAG 861 0.453 MSIIQFVDLNVQATNVTIVYRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHIMLTDFDLSLKGDDTTSTAQIVFDQDPPTNTYSNEHSKNQCAPAMSSCMLPNCIVPSVPCFHPKRGRSKRSSRCGSLEIIAEPIEIRSTSFVGTHEYLAPEVISGEGHGNAVDWWTLGVFLFEMFYGITPFKGLEHELTLANIVARALEFPKEPMIPGSARDLISQLLVKDSTMRLGSRMGAVAIKHHPFFNGVNWALLRCATPPYIPSSEKCKELVRVYDCTNNAIDFY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2568 286 Gene3D Transferase(Phosphotransferase) domain 1 143 265 - -
Aed1g2568 286 Pfam Protein kinase domain 144 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2568 286 Pfam Protein kinase domain 20 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2568 286 SUPERFAMILY Protein kinase-like (PK-like) 20 265 IPR011009 -
Aed1g2568 286 Gene3D Transferase(Phosphotransferase) domain 1 20 75 - -
Aed1g2568 286 PANTHER FLIPPASE KINASE 1-RELATED 20 286 - -
Aed1g2568 286 ProSiteProfiles Protein kinase domain profile. 1 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2568 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Aed1g2568 286 SMART serkin_6 3 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2568 286 PANTHER PROTEIN KINASE G11A-LIKE 20 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2568 Aed-Chr1 21339365 21340255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2568 21 286 AGC Kinase Gene Family AT3G44610 62.731 6.42e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed1g2568 Pkinase 4.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2568 K08286 - gmx:100786154 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2568 1 21339365 21340255 Aed1g2568 1 21339365 21340255 ECH