Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g2538 | ATGATGCCCCCTCAACAAGAAACCACTATTGCACCAAACATTAATCCAGCCATCACAACCCGATCACCAGAGAGTAGCTCGGTCCACCATGAATCTGAGGGTTCTTCTAACTCTAACAAAATCAAACCAAGTTTGGAATTAGATCATCATCATCATCATAATGATAATGGCGTTCCCGCGCAGCATCACGCTCAGCCAACACCACCACCACCACCACAAAGATTTTCCGTTCTTCACCAATCCTTGCGCCCTATTACCCTCAAATTTGAAGACGTATCCTACTCTATAAGCTTCGAAAGCCAGAAGAAGAAGGGTTGTGTCTTACGTAAAGAGTCAAAGCTAAGCAGAAAAGTCCTCACGGGCGTGACCGGAGTAGCCAACCCGGGCGAGTTAACGGCAATGCTGGGTCCCTCCGGAAGCGGCAAGACGACACTCCTAACCGCCCTGGCCGGAAGACTCGCCGGAAAAGTCTCCGGCACCATAACCTACAACGGCCACACCGACCCCACCTTCGTGAAACGCAGGGTCGGGTTCGTGCCCCAAGACGACGTCCTCTACCCTCACCTCACGGTGTTGGAGACCCTCACCTACGCAGCGCTGTTGAGGCTTCCGAAGAGTTTGAGCAGAGAAGAGAAGAAGGAGCACGCGGAGATGGTGATCGCGGATCTCGGCCTCACACGGTGTCGTAACAGCCCGGTCGGAGGCTGCATGGCTCTGTTCCGCGGCATTTCGGGAGGGGAGCGGAAACGGGTCAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTTTGTTGTTCGTTGACGAGCCCACTTCGGGCTTGGACTCCACCACAGCCCAACTTATCGTCTCTGTGCTCCGCGGCCTCGCCCGGGCGGGCCGCACCGTTGTCGCCACCATCCACCAGCCCTCCAGCCGGTTGTATAGGATGTTTGATAAGGTGATCGTGTTGTCGGACGGAAACCCGATTTATAGCGGGCAAGCGGGTCGGGTCATGGACTATCTTGGATCCGTTGGGTATGCCCCGGCTTTCAACTTCATGAACCCGGCAGATTTCCTACTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACATGATGATCAGATAGACCACCATGAGGATCAAGCTTCGGTCAAACAGTCCCTAATTTCATCTTTTAAGAAGAACTTATATCCTGCTCTTAAAGAAGACATTCATCAAAACAACAGTGATCCGTTGGCTTTTACATCAGGTACACCAAGACGTTCGGATAACCAATGGACCTCTAGCTGGTGGGAGCAATTCAGGGTGCTTCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCTTTTTCTGGCTTAAGAATTTTCCAAGTCTTGTCTGTGTCCATTCTCTCAGGACTTCTGTGGTGGCACTCTGATCCTGCACATGTACAAGATCAGAGGCCAATGCTAACAAAAGAAAGATCATCAGGGATGTACAAACTCTCCTCATACTATGTTTCCAGAATGGTGGGAGATTTACCAATGGAGCTAGTGCTTCCTACCATCTTTGTAACAATCTCATACTGGATGGGGGGTCTCAAGCCTTCAATGGTCACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTGCTAGTCTCTCAAGGCATAGGGTTAGCACTTGGGGCCATTCTCATGGATGTGAAGCAGGCCACAACTCTAGCCTCGGTGACCATGCTGGTGTTTCTCTTGGCTGGTGGCTACTACATTCAGCAAATGCCTTCTTTCATTGCTTGGTTGCAGTACATTTCTTTCAGCCACTACTGCTATAAGCTACTGGTAGGAGTCCAGTATTCAATAAATGAGGTGTACGAGTGTGGACCAGGGTTGCATTGTAGGGTAAGAGATTTTCCTGCCATAAAGTGTTTAGGGCTTGATGATACTATGTGGGGAGATGTGGCAGCATTGACTGTTATGTTGATTGGATACAGAGTTGTAGCATATCTAGCTTTGAGGATGGGGCAGCCTCACTGA | 1998 | 0.4995 | MMPPQQETTIAPNINPAITTRSPESSSVHHESEGSSNSNKIKPSLELDHHHHHNDNGVPAQHHAQPTPPPPPQRFSVLHQSLRPITLKFEDVSYSISFESQKKKGCVLRKESKLSRKVLTGVTGVANPGELTAMLGPSGSGKTTLLTALAGRLAGKVSGTITYNGHTDPTFVKRRVGFVPQDDVLYPHLTVLETLTYAALLRLPKSLSREEKKEHAEMVIADLGLTRCRNSPVGGCMALFRGISGGERKRVSIGQEMLVNPSLLFVDEPTSGLDSTTAQLIVSVLRGLARAGRTVVATIHQPSSRLYRMFDKVIVLSDGNPIYSGQAGRVMDYLGSVGYAPAFNFMNPADFLLDLANGIVADVKHDDQIDHHEDQASVKQSLISSFKKNLYPALKEDIHQNNSDPLAFTSGTPRRSDNQWTSSWWEQFRVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHSDPAHVQDQRPMLTKERSSGMYKLSSYYVSRMVGDLPMELVLPTIFVTISYWMGGLKPSMVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPSFIAWLQYISFSHYCYKLLVGVQYSINEVYECGPGLHCRVRDFPAIKCLGLDDTMWGDVAALTVMLIGYRVVAYLALRMGQPH | 665 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g2538 | 665 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 21 | 61 | 474 | - | - | |
Aed1g2538 | 665 | Pfam | ABC-2 type transporter | 300 | 364 | IPR043926 | GO:0140359 | |
Aed1g2538 | 665 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 21 | 474 | 662 | - | - | |
Aed1g2538 | 665 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Aed1g2538 | 665 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 61 | 474 | - | - | |
Aed1g2538 | 665 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 474 | 662 | - | - | |
Aed1g2538 | 665 | CDD | ABCG_EPDR | 84 | 325 | - | - | |
Aed1g2538 | 665 | Gene3D | - | 79 | 339 | IPR027417 | - | |
Aed1g2538 | 665 | SMART | AAA_5 | 128 | 320 | IPR003593 | - | |
Aed1g2538 | 665 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 87 | 343 | IPR003439 | GO:0005524 | |
Aed1g2538 | 665 | MobiDBLite | consensus disorder prediction | 43 | 58 | - | - | |
Aed1g2538 | 665 | Pfam | ABC transporter | 122 | 271 | IPR003439 | GO:0005524 | |
Aed1g2538 | 665 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 116 | 335 | IPR027417 | - | |
Aed1g2538 | 665 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Aed1g2538 | 665 | ProSitePatterns | ABC transporters family signature. | 243 | 257 | IPR017871 | GO:0005524 | |
Aed1g2538 | 665 | Pfam | ABC-2 type transporter | 473 | 606 | IPR013525 | GO:0016020|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g2538 | Aed-Chr1 | 21054948 | 21059219 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g2538 | 126 | 325 | Calmodulin-binding Proteins | AT2G36910 | 24.757 | 6.02e-09 | 57.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g2538 | K05681 | - | gmx:100792991 | 1167.53 |