Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2535 ATGGCAAGGATCAAACCTCAGGCTCTTCTACAACAAAGCAAAAGGAAGAAGGGTCCTTCGCGGATAACCGCCTCGACTGTTATATTTTATTTTTTGATTCTTGCCTTGGTTGGGTTTTTCCTGTTTGCTTCCTACAGACATTGGTCCAGCAGGTCAAGATTGCAATCAGAAGATCACTTGTCAGTCTCTGAGGTTTTAAATACCTCTAAAGGTTTTATAATAATAGAACTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGTCAAAAAGGGCACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTATGTGATTCAGGCAGGGGATAACCAAGGAACTGGAGCTACTGAAGATTGGAACTTGAGAGGAAAGCAACATACGATTACTAGGTTCTCTTATTCTTCTGCATTCATGCTTGGAACTTCCAAGGGCAAACACAACAACAAAGGATTTGATCTTTTTATTACAACTGCACCGATACCAGATCTAAATGAGAAAATTATTGTGTTTGGGCAAGTCATCAAGGGAGAGGATGTTGTGCAGGAAATTGAAGAAGTGGATACAGATGAACATTACAAGCCTAAAGTATCTATTGGGATACTTGACGTGACTCTTAAACAAAAGGTCTGA 651 0.3932 MARIKPQALLQQSKRKKGPSRITASTVIFYFLILALVGFFLFASYRHWSSRSRLQSEDHLSVSEVLNTSKGFIIIELYKESAPEVVDEFIDLCQKGHFKGMLFHKVIKHYVIQAGDNQGTGATEDWNLRGKQHTITRFSYSSAFMLGTSKGKHNNKGFDLFITTAPIPDLNEKIIVFGQVIKGEDVVQEIEEVDTDEHYKPKVSIGILDVTLKQKV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2535 216 Gene3D - 46 216 IPR029000 -
Aed1g2535 216 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 66 210 IPR002130 GO:0000413|GO:0003755
Aed1g2535 216 SUPERFAMILY Cyclophilin-like 65 212 IPR029000 -
Aed1g2535 216 CDD cyclophilin 65 209 - -
Aed1g2535 216 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 159 171 IPR002130 GO:0000413|GO:0003755
Aed1g2535 216 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 115 IPR002130 GO:0000413|GO:0003755
Aed1g2535 216 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 92 IPR002130 GO:0000413|GO:0003755
Aed1g2535 216 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 187 IPR002130 GO:0000413|GO:0003755
Aed1g2535 216 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 216 - -
Aed1g2535 216 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 71 212 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2535 Aed-Chr1 21034716 21039395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2535 68 212 U-box Gene Family AT5G67530 29.252 2.49e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2535 - - gmx:100781538 397.127